RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 FBXL16Q8N461 479 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 PPP1R13LQ8WUF5 828 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 INPP4AQ96PE3 977 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-217ENST00000489719 KATNAL1Q9BW62 490 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 EHMT1Q9H9B1 1298 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 FAM217BQ9NTX9 383 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-217ENST00000489719 FIBPO43427 364 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 ACRP10323 421 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 UBA1P22314 1058 aaKnown RBP20.47■□□□□ 0.87
ABCF3-217ENST00000489719 FUT2Q10981 343 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 UBE2SQ16763 222 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 HSDL1Q3SXM5 330 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 TMEM240Q5SV17 173 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 WWC2Q6AWC2 1192 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 C7orf31Q8N865 590 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 RETREG2Q8NC44 543 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 KAT2BQ92831 832 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.47■□□□□ 0.874e-8■□□□□ 10.1
ABCF3-217ENST00000489719 IL23AQ9NPF7 189 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 PCDHA6Q9UN73 950 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 PCDHA8Q9Y5H6 950 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 CNTNAP5Q8WYK1 1306 aa20.47■□□□□ 0.87
ABCF3-217ENST00000489719 hCG_1984214I3L0E3 225 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 NOP56O00567 594 aaKnown RBP20.46■□□□□ 0.87
ABCF3-217ENST00000489719 FGBP02675 491 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 PSEN2P49810 448 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 SMAD3P84022 425 aaKnown RBP20.46■□□□□ 0.87
ABCF3-217ENST00000489719 AKAP17AQ02040 695 aaKnown RBP20.46■□□□□ 0.87
ABCF3-217ENST00000489719 PTGISQ16647 500 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 PSRC1Q6PGN9 363 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-217ENST00000489719 ZNF365Q70YC5 407 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 RUFY3Q7L099 469 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 C16orf59Q7L2K0 433 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 TEX2Q8IWB9 1127 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 ZNF713Q8N859 430 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-217ENST00000489719 ALG1Q9BT22 464 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 GLT8D2Q9H1C3 349 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 RIC8AQ9NPQ8 531 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 CYP46A1Q9Y6A2 500 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 UMODL1Q5DID0 1318 aa20.46■□□□□ 0.87
ABCF3-217ENST00000489719 MYH6P13533 1939 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-217ENST00000489719 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-217ENST00000489719 SMCO2A6NFE2 343 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 BFSP2Q13515 415 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 MFSD10Q14728 455 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 FAM109BQ6ICB4 259 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-217ENST00000489719 PPP1R18Q6NYC8 613 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 Q7L0L9 218 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 CYFIP1Q7L576 1253 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 SESTD1Q86VW0 696 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 GIMAP8Q8ND71 665 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-217ENST00000489719 CDHR1Q96JP9 859 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 SENP7Q9BQF6 1050 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 MTIF3Q9H2K0 278 aaKnown RBP20.45■□□□□ 0.86
ABCF3-217ENST00000489719 ZSWIM6Q9HCJ5 1215 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 BARHL2Q9NY43 387 aa20.45■□□□□ 0.86
ABCF3-217ENST00000489719 FOSP01100 380 aaPredicted RBP20.44■□□□□ 0.86
ABCF3-217ENST00000489719 ZNF286BP0CG31 522 aa20.44■□□□□ 0.86
ABCF3-217ENST00000489719 ADCY7P51828 1080 aa20.44■□□□□ 0.86
ABCF3-217ENST00000489719 KIAA0753Q2KHM9 967 aa20.44■□□□□ 0.86
ABCF3-217ENST00000489719 METTL7BQ6UX53 244 aa20.44■□□□□ 0.86
ABCF3-217ENST00000489719 AGXT2Q9BYV1 514 aa20.44■□□□□ 0.86
ABCF3-217ENST00000489719 TM6SF1Q9BZW5 370 aa20.44■□□□□ 0.86
ABCF3-217ENST00000489719 HDAC6Q9UBN7 1215 aa20.44■□□□□ 0.86
ABCF3-217ENST00000489719 STXBP3O00186 592 aa20.43■□□□□ 0.86
ABCF3-217ENST00000489719 F2P00734 622 aa20.43■□□□□ 0.86
ABCF3-217ENST00000489719 HOXD8P13378 290 aaPredicted RBP20.43■□□□□ 0.86
ABCF3-217ENST00000489719 PFKFB3Q16875 520 aaPredicted RBP20.43■□□□□ 0.86
ABCF3-217ENST00000489719 GDF6Q6KF10 455 aaPredicted RBP20.43■□□□□ 0.86
ABCF3-217ENST00000489719 CCDC155Q8N6L0 562 aa20.43■□□□□ 0.86
ABCF3-217ENST00000489719 GPRASP2Q96D09 838 aa20.43■□□□□ 0.86
ABCF3-217ENST00000489719 SCLYQ96I15 445 aa20.43■□□□□ 0.86
ABCF3-217ENST00000489719 WNT8AQ9H1J5 351 aa20.43■□□□□ 0.86
ABCF3-217ENST00000489719 BCAS3Q9H6U6 928 aa20.43■□□□□ 0.86
ABCF3-217ENST00000489719 HAS3O00219 553 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 MAFGO15525 162 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
ABCF3-217ENST00000489719 SCG2P13521 617 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 PDIA3P30101 505 aaKnown RBP20.42■□□□□ 0.86
ABCF3-217ENST00000489719 SEMA3FQ13275 785 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 ZNF697Q5TEC3 545 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 TYW1BQ6NUM6 668 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 MTMR10Q9NXD2 777 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 GTF2IRD1Q9UHL9 959 aa20.42■□□□□ 0.86
ABCF3-217ENST00000489719 LTBP2Q14767 1821 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 H3BRB1 525 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 PITPNM1O00562 1244 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
ABCF3-217ENST00000489719 CCT2P78371 535 aaKnown RBP20.41■□□□□ 0.86
ABCF3-217ENST00000489719 OTOP2Q7RTS6 562 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 CCDC12Q8WUD4 166 aaPredicted RBP20.41■□□□□ 0.86
ABCF3-217ENST00000489719 HERVK_113Q902F9 699 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 C16orf70Q9BSU1 422 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 TUT1Q9H6E5 874 aaKnown RBP20.41■□□□□ 0.86
ABCF3-217ENST00000489719 JADE2Q9NQC1 790 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 UBIAD1Q9Y5Z9 338 aa20.41■□□□□ 0.86
ABCF3-217ENST00000489719 PFKMP08237 780 aa20.4■□□□□ 0.86
ABCF3-217ENST00000489719 IQCF3P0C7M6 154 aa20.4■□□□□ 0.86
ABCF3-217ENST00000489719 ITGB5P18084 799 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms