RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 FER1L6Q2WGJ9 1857 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 TUBBP07437 444 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 MAN2A1Q16706 1144 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 Q4G0T1 1027 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 SH3BP5LQ7L8J4 393 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 FBXO11Q86XK2 927 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 CCDC65Q8IXS2 484 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 PRMT6Q96LA8 375 aaPredicted RBP16.63■□□□□ 0.25
COL9A1-208ENST00000489611 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 SEMA6BQ9H3T3 888 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 SLC39A2Q9NP94 309 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 SRCAPQ6ZRS2 3230 aa16.63■□□□□ 0.25
COL9A1-208ENST00000489611 GNA14O95837 355 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 HNRNPH3P31942 346 aaKnown RBP16.62■□□□□ 0.25
COL9A1-208ENST00000489611 MIIPQ5JXC2 388 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 ZNF569Q5MCW4 686 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 RSRC2Q7L4I2 434 aaKnown RBP16.62■□□□□ 0.25
COL9A1-208ENST00000489611 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 CRYGNQ8WXF5 182 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 NAPGQ99747 312 aaPredicted RBP16.62■□□□□ 0.25
COL9A1-208ENST00000489611 TDRD3Q9H7E2 651 aaKnown RBP16.62■□□□□ 0.25
COL9A1-208ENST00000489611 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 BMP3P12645 472 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
COL9A1-208ENST00000489611 WHAMMP3Q1A5X7 153 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 VWA3BQ502W6 1294 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 SYDE2Q5VT97 1194 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 CIAPIN1Q6FI81 312 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 SIAH1Q8IUQ4 282 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 KRT222Q8N1A0 295 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 CEP63Q96MT8 703 aa16.62■□□□□ 0.25
COL9A1-208ENST00000489611 SPDYE3A6NKU9 549 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 EIF3CLB5ME19 914 aaKnown RBP16.61■□□□□ 0.25
COL9A1-208ENST00000489611 RNF225M0QZC1 329 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-208ENST00000489611 SOCS7O14512 581 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 MEIS2O14770 477 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 KRT86O43790 486 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 IDEP14735 1019 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 SREBF1P36956 1147 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 ARHGAP4P98171 946 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 TMCO3Q6UWJ1 677 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 DYMQ7RTS9 669 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 TXLNBQ8N3L3 684 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 DNAJC19Q96DA6 116 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 EIF3CQ99613 913 aaKnown RBP16.61■□□□□ 0.25
COL9A1-208ENST00000489611 SYT17Q9BSW7 474 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 NUCKS1Q9H1E3 243 aaKnown RBP16.61■□□□□ 0.25
COL9A1-208ENST00000489611 NDST4Q9H3R1 872 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
COL9A1-208ENST00000489611 PIK3CDO00329 1044 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 NDUFB10O96000 172 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 CIITAP33076 1130 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 FAM26FQ5R3K3 315 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 ACRBPQ8NEB7 543 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 TSGA10Q9BZW7 698 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 PANK4Q9NVE7 773 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 FAM53CQ9NYF3 392 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 HDAC9Q9UKV0 1011 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L15C9J2P7 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L13C9JLJ4 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L11C9JVI0 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L18D6R9N7 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L22D6RA61 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L17D6RBQ6 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L19D6RCP7 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L20D6RJB6 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 RAD21O60216 631 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 SLURP2P0DP57 97 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 ARHGAP25P42331 645 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L24Q0WX57 530 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 COASYQ13057 564 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 WDR59Q6PJI9 974 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 USP17L6PQ6QN14 398 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 OGFOD1Q8N543 542 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 AGBL3Q8NEM8 1001 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 PCMTD1Q96MG8 357 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-208ENST00000489611 CSRNP1Q96S65 589 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 PLAGL2Q9UPG8 496 aa16.6■□□□□ 0.25
COL9A1-208ENST00000489611 CYP3A4P08684 503 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 CHMP4BP1P59074 171 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 FAM193AP78312 1265 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 CBX1P83916 185 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 IKQ13123 557 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-208ENST00000489611 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 CHP1Q99653 195 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
COL9A1-208ENST00000489611 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 PLA2G4BP0C869 781 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 SPDYE6P0CI01 402 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 RPA1P27694 616 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 MARSP56192 900 aaKnown RBP16.58■□□□□ 0.25
COL9A1-208ENST00000489611 DLGAP5Q15398 846 aa16.58■□□□□ 0.25
COL9A1-208ENST00000489611 ZCWPW2Q504Y3 356 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms