RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 WDR93Q6P2C0 686 aa21.74■■□□□ 1.07
SYNGR1-207ENST00000489206 HDXQ7Z353 690 aa21.74■■□□□ 1.07
SYNGR1-207ENST00000489206 CCDC65Q8IXS2 484 aa21.74■■□□□ 1.07
SYNGR1-207ENST00000489206 DNAJC18Q9H819 358 aa21.74■■□□□ 1.07
SYNGR1-207ENST00000489206 KCNMB3Q9NPA1 279 aa21.74■■□□□ 1.07
SYNGR1-207ENST00000489206 USO1O60763 962 aaKnown RBP21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 MCM3P25205 808 aa21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 FKBP3Q00688 224 aaKnown RBP21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 SF3B2Q13435 895 aaKnown RBP21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 ECM1Q16610 540 aa21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 SLFN12Q8IYM2 578 aa21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 CEP63Q96MT8 703 aa21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 PANK4Q9NVE7 773 aa21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 PI4KBQ9UBF8 816 aa21.73■■□□□ 1.07
SYNGR1-207ENST00000489206 ATP1A1P05023 1023 aaKnown RBP21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 SLC1A4P43007 532 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 GPS2Q13227 327 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 SLFN13Q68D06 897 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 NCAPH2Q6IBW4 605 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 TXLNBQ8N3L3 684 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 ANO3Q9BYT9 981 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 ZHX1Q9UKY1 873 aaPredicted RBP21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 GNA14O95837 355 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 OAS2P29728 719 aaKnown RBP21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 CDC37Q16543 378 aaPredicted RBP21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 CERKLQ49MI3 558 aaPredicted RBP21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 STRIP1Q5VSL9 837 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 SECISBP2LQ93073 1101 aaKnown RBP21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 LACRTQ9GZZ8 138 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 PCDHA1Q9Y5I3 950 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 COL4A3BPQ9Y5P4 624 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 STK24Q9Y6E0 443 aa21.72■■□□□ 1.07
SYNGR1-207ENST00000489206 RHOXF2BP0C7M4 288 aa21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 EEF2P13639 858 aaKnown RBP21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 FLAD1Q8NFF5 587 aa21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 RHOXF2Q9BQY4 288 aa21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 NUCKS1Q9H1E3 243 aaKnown RBP21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 MMRN2Q9H8L6 949 aa21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 L1RE1Q9UN81 338 aa21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 SCN9AQ15858 1988 aa21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 PITPNM2Q9BZ72 1349 aa21.71■■□□□ 1.07
SYNGR1-207ENST00000489206 RCCD1A6NED2 376 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 TBX3O15119 743 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 NKRFO15226 690 aaKnown RBP eCLIP21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 EIF3JO75822 258 aaKnown RBP21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 TMEM179Q6ZVK1 233 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 NOA1Q8NC60 698 aaKnown RBP21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 TRIM58Q8NG06 486 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 NEK11Q8NG66 645 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 PKNOX2Q96KN3 472 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 TRIM34Q9BYJ4 488 aa21.7■■□□□ 1.07
SYNGR1-207ENST00000489206 PLA2G4BP0C869 781 aa21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 MARSP56192 900 aaKnown RBP21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 HAUS3Q68CZ6 603 aa21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 IQCEQ6IPM2 695 aa21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 C2CD5Q86YS7 1000 aa21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 CCDC125Q86Z20 511 aa21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 ZFPM1Q8IX07 1006 aa21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 FAM207AQ9NSI2 230 aaPredicted RBP21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 ARHGAP20Q9P2F6 1191 aa21.7■■□□□ 1.06
SYNGR1-207ENST00000489206 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 TARSL2A2RTX5 802 aaKnown RBP21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 ENC1O14682 589 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 TFRCP02786 760 aaKnown RBP21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 KIF11P52732 1056 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 USP14P54578 494 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 VSNL1P62760 191 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 PPP4R3CPQ6ZMV5 832 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 COL23A1Q86Y22 540 aaPredicted RBP21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 GMCL1P1Q8NEA9 526 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 BAP1Q92560 729 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 AKT1S1Q96B36 256 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 IFIH1Q9BYX4 1025 aaKnown RBP21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 ABCB6Q9NP58 842 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 KIAA1024Q9UPX6 916 aa21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 COL2A1P02458 1487 aaPredicted RBP21.69■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L15C9J2P7 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L13C9JLJ4 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L11C9JVI0 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L18D6R9N7 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L22D6RA61 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L17D6RBQ6 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L19D6RCP7 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L20D6RJB6 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 ZNF263O14978 683 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 TACC1O75410 805 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L24Q0WX57 530 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 LRRC41Q15345 812 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 PDXDC1Q6P996 788 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 USP17L6PQ6QN14 398 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 CRYGNQ8WXF5 182 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 SYN2Q92777 582 aaPredicted RBP21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 GMCL1Q96IK5 515 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 CAMKK2Q96RR4 588 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 AMNQ9BXJ7 453 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 DEF6Q9H4E7 631 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 SH2D4AQ9H788 454 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 HDAC6Q9UBN7 1215 aa21.68■■□□□ 1.06
SYNGR1-207ENST00000489206 FAM198AQ9UFP1 575 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms