RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 KCNA1Q09470 495 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 ANKRD20A4Q4UJ75 823 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 ANKRD20A8PQ5CZ79 823 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 ANKRD20A2Q5SQ80 823 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 ANKRD20A1Q5TYW2 823 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 AMNQ9BXJ7 453 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 EPS15L1Q9UBC2 864 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 TBK1Q9UHD2 729 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 HMGB1P1B2RPK0 211 aaPredicted RBP16.62■□□□□ 0.25
PKD1-220ENST00000487932 PTGDRQ13258 359 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 TMTC3Q6ZXV5 915 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 ZWILCHQ9H900 591 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 SLC9A5Q14940 896 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 MSH2P43246 934 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 RECQLP46063 649 aaPredicted RBP16.62■□□□□ 0.25
PKD1-220ENST00000487932 GUCY2DQ02846 1103 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 ME3Q16798 604 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 COG4Q9H9E3 785 aa16.62■□□□□ 0.25
PKD1-220ENST00000487932 ZMYM6O95789 1325 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 A6NNZ2 444 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 H3BRJ5 948 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 ZKSCAN8Q15776 578 aaPredicted RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 TUBB8Q3ZCM7 444 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 ACCSLQ4AC99 568 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 KCTD16Q68DU8 428 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 TRIM59Q8IWR1 403 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 NEUROG2Q9H2A3 272 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 PCGF5Q86SE9 256 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 SCN4BQ8IWT1 228 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 BBOF1Q8ND07 529 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 OR6B3Q8NGW1 331 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 TEKT2Q9UIF3 430 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 UBE2TQ9NPD8 197 aaPredicted RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 GOLGA8IPA6NC78 632 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 GOLGA8JA6NMD2 632 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 PSMC2P35998 433 aaKnown RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 KIF19Q2TAC6 998 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 YIPF2Q9BWQ6 316 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 RPF1Q9H9Y2 349 aaKnown RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 MED7O43513 233 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 PRPSAP2O60256 369 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 DNAJC24Q6P3W2 148 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 ZNF513Q8N8E2 541 aaPredicted RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 LZICQ8WZA0 190 aa16.61■□□□□ 0.25
PKD1-220ENST00000487932 JPH2Q9BR39 696 aaPredicted RBP16.61■□□□□ 0.25
PKD1-220ENST00000487932 F5H423 210 aaPredicted RBP16.6■□□□□ 0.25
PKD1-220ENST00000487932 NR2F2P24468 414 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 BPIFB4P59827 614 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 DYNLL1P63167 89 aaKnown RBP16.6■□□□□ 0.25
PKD1-220ENST00000487932 SGO2Q562F6 1265 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 CAPRIN1Q14444 709 aaKnown RBP16.6■□□□□ 0.25
PKD1-220ENST00000487932 PTPN21Q16825 1174 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 WHAMMP3Q1A5X7 153 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 FAM186BQ8IYM0 893 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 CEP19Q96LK0 163 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 MAP3K7O43318 606 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 TCP11X2Q5H9J9 407 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 SARS2Q9NP81 518 aaKnown RBP16.6■□□□□ 0.25
PKD1-220ENST00000487932 STAT2P52630 851 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 NCLNQ969V3 563 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 UHRF1BP1Q6BDS2 1440 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 GOLGA8KD6RF30 607 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 KCNQ3O43525 872 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 ART3Q13508 389 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 CCDC124Q96CT7 223 aaKnown RBP16.6■□□□□ 0.25
PKD1-220ENST00000487932 GREM2Q9H772 168 aa16.6■□□□□ 0.25
PKD1-220ENST00000487932 BTBD18B2RXH4 712 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 TTLL1O95922 423 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
PKD1-220ENST00000487932 PTK2BQ14289 1009 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 MXD4Q14582 209 aaPredicted RBP16.59■□□□□ 0.25
PKD1-220ENST00000487932 COA7Q96BR5 231 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 GOLGA8QA0A0J9YX86 632 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 GOLGA8OA6NCC3 632 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 GOLGA8NF8WBI6 632 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 INTUQ9ULD6 942 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 TMEM247A6NEH6 219 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 AFF4Q9UHB7 1163 aaKnown RBP16.59■□□□□ 0.25
PKD1-220ENST00000487932 CLIC4Q9Y696 253 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 A2MP01023 1474 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 DENND3A2RUS2 1198 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 CRKLP46109 303 aaKnown RBP16.59■□□□□ 0.25
PKD1-220ENST00000487932 OCRLQ01968 901 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 GLE1Q53GS7 698 aaKnown RBP16.59■□□□□ 0.25
PKD1-220ENST00000487932 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
PKD1-220ENST00000487932 PDXDC2PQ6P474 469 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
PKD1-220ENST00000487932 PIP4K2CQ8TBX8 421 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 AFG1LQ8WV93 481 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 IQCDQ96DY2 449 aa16.59■□□□□ 0.25
PKD1-220ENST00000487932 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.25
PKD1-220ENST00000487932 GFPT2O94808 682 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms