RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 PASKQ96RG2 1323 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 UBE2Q2LH0YL09 131 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 TOMM70O94826 608 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 CALM1P0DP23 149 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 CALM2P0DP24 149 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 CALM3P0DP25 149 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 METAP2P50579 478 aaKnown RBP eCLIP8.91□□□□□ -0.98
GARNL3-218ENST00000487565 FSTL1Q12841 308 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 MAP3K11Q16584 847 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-218ENST00000487565 MOB2Q70IA6 237 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 CHSY3Q70JA7 882 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 CCDC84Q86UT8 332 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-218ENST00000487565 RAB11FIP4Q86YS3 637 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 CTCFLQ8NI51 663 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-218ENST00000487565 NUP133Q8WUM0 1156 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 ANKS1AQ92625 1134 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 VTI1AQ96AJ9 217 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 TMX3Q96JJ7 454 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 SLC30A3Q99726 388 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 TMEM47Q9BQJ4 181 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 MYL10Q9BUA6 226 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 SLKQ9H2G2 1235 aaPredicted RBP8.91□□□□□ -0.98
GARNL3-218ENST00000487565 ELP3Q9H9T3 547 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 CLIP2Q9UDT6 1046 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 BRPF3Q9ULD4 1205 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 TPCN1Q9ULQ1 816 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 KCNH4Q9UQ05 1017 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 MTMR7Q9Y216 660 aa8.91□□□□□ -0.98
GARNL3-218ENST00000487565 UNCXA6NJT0 531 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 LARGE1O95461 756 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 HSP90AA1P07900 732 aaKnown RBP8.9□□□□□ -0.98
GARNL3-218ENST00000487565 PTPRAP18433 802 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 RXRAP19793 462 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 WEE1P30291 646 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 KIF5BP33176 963 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 NOVP48745 357 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 EVCP57679 992 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 SPEM2Q0P670 501 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 STK3Q13188 491 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 ZYXQ15942 572 aaKnown RBP8.9□□□□□ -0.98
GARNL3-218ENST00000487565 CCDC96Q2M329 555 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 BTLAQ7Z6A9 289 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 CCDC144CPQ8IYA2 1237 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 GMCL1P1Q8NEA9 526 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 ACER1Q8TDN7 264 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 GTF3C6Q969F1 213 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-218ENST00000487565 ZNF274Q96GC6 653 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-218ENST00000487565 CLMNQ96JQ2 1002 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 WDR18Q9BV38 432 aa8.9□□□□□ -0.98
GARNL3-218ENST00000487565 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.89□□□□□ -0.99
GARNL3-218ENST00000487565 CCDC196A0A1B0GTZ2 297 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 TRIM75PA6NK02 468 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 CPLX1O14810 134 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 DHX16O60231 1041 aaKnown RBP8.89□□□□□ -0.99
GARNL3-218ENST00000487565 PFKFB2O60825 505 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 NDUFB10O96000 172 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 PDIA3P30101 505 aaKnown RBP8.89□□□□□ -0.99
GARNL3-218ENST00000487565 ECE1P42892 770 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 USP14P54578 494 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 HUNKP57058 714 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 PPIL2Q13356 520 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 GRM4Q14833 912 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 ME3Q16798 604 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 ASPRV1Q53RT3 343 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 LDLRAD1Q5T700 205 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 CPLX2Q6PUV4 134 aaKnown RBP8.89□□□□□ -0.99
GARNL3-218ENST00000487565 ERO1BQ86YB8 467 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 CCDC83Q8IWF9 413 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 NECAB1Q8N987 351 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 DCAF4Q8WV16 495 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 CHMP4CQ96CF2 233 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 KIAA1683Q9H0B3 1180 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 VCPKMTQ9H867 229 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 NCOA5Q9HCD5 579 aaKnown RBP8.89□□□□□ -0.99
GARNL3-218ENST00000487565 RBM28Q9NW13 759 aaKnown RBP8.89□□□□□ -0.99
GARNL3-218ENST00000487565 TMX2Q9Y320 296 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 ZHX2Q9Y6X8 837 aa8.89□□□□□ -0.99
GARNL3-218ENST00000487565 TRPM7Q96QT4 1865 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 A0A1W2PRG0 241 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 PIK3R2O00459 728 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 SIN3BO75182 1162 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 CDKL5O76039 1030 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 PARP1P09874 1014 aaKnown RBP8.88□□□□□ -0.99
GARNL3-218ENST00000487565 PDHBP11177 359 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 HOXB4P17483 251 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-218ENST00000487565 SLC1A4P43007 532 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 CCT2P78371 535 aaKnown RBP8.88□□□□□ -0.99
GARNL3-218ENST00000487565 PPATQ06203 517 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 TROAPQ12815 778 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 SPP2Q13103 211 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 SLFN13Q68D06 897 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 GPAT2Q6NUI2 795 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 RASGRP2Q7LDG7 609 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 RAB44Q7Z6P3 723 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-218ENST00000487565 SPICE1Q8N0Z3 855 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 LPAR1Q92633 364 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 MKL1Q969V6 931 aa8.88□□□□□ -0.99
GARNL3-218ENST00000487565 OPTNQ96CV9 577 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms