RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ZNF385BQ569K4 471 aa6.32□□□□□ -1.4
LINC00888-204ENST00000487386 HABP4Q5JVS0 413 aaKnown RBP6.32□□□□□ -1.4
LINC00888-204ENST00000487386 B3GNT8Q7Z7M8 397 aa6.32□□□□□ -1.4
LINC00888-204ENST00000487386 AQP7O14520 342 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 WNT9AO14904 365 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 DGKIO75912 1065 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 MC3RP41968 323 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 CAP1Q01518 475 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 CACNB2Q08289 660 aaPredicted RBP6.31□□□□□ -1.4
LINC00888-204ENST00000487386 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 TRIM61Q5EBN2 209 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 STEAP3Q658P3 488 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 CIAPIN1Q6FI81 312 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 MILR1Q7Z6M3 343 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 GSTCDQ8NEC7 633 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 SLC6A20Q9NP91 592 aa6.31□□□□□ -1.4
LINC00888-204ENST00000487386 ARVCFO00192 962 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 RFXAPO00287 272 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 KCNQ2O43526 872 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 NUAK1O60285 661 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 SOD2P04179 222 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 LIMS1P48059 325 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 SQSTM1Q13501 440 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 CNKSR3Q6P9H4 555 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 SIAH1Q8IUQ4 282 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 ZSCAN18Q8TBC5 510 aaPredicted RBP6.3□□□□□ -1.4
LINC00888-204ENST00000487386 PIP4K2CQ8TBX8 421 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 PDGFDQ9GZP0 370 aaPredicted RBP6.3□□□□□ -1.4
LINC00888-204ENST00000487386 IRF2BPLQ9H1B7 796 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 SMOC1Q9H4F8 434 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 IPPKQ9H8X2 491 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 KANSL2Q9H9L4 492 aa6.3□□□□□ -1.4
LINC00888-204ENST00000487386 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.29□□□□□ -1.4
LINC00888-204ENST00000487386 TCRBV5S2A0A599 114 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 FAM47E-STBD1D6RA91 191 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 PLA2G1BP04054 148 aaKnown RBP6.29□□□□□ -1.4
LINC00888-204ENST00000487386 HTRA3P83110 453 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 FZD5Q13467 585 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 ETV3LQ6ZN32 361 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 LCNL1Q6ZST4 164 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 FAM126BQ8IXS8 530 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 PCDH19Q8TAB3 1148 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 SLC7A14Q8TBB6 771 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 PHOSPHO1Q8TCT1 267 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 ALG1Q9BT22 464 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 SLC52A2Q9HAB3 445 aa6.29□□□□□ -1.4
LINC00888-204ENST00000487386 EFCAB14O75071 495 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 C8BP07358 591 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 PAK1Q13153 545 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 TMEM151BQ8IW70 566 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 ARRDC4Q8NCT1 418 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 SMARCC2Q8TAQ2 1214 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 UHMK1Q8TAS1 419 aaKnown RBP6.28□□□□□ -1.4
LINC00888-204ENST00000487386 SH3TC2Q8TF17 1288 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 PWWP2AQ96N64 755 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 KCNJ15Q99712 375 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
LINC00888-204ENST00000487386 NCOA5Q9HCD5 579 aaKnown RBP6.28□□□□□ -1.4
LINC00888-204ENST00000487386 ASH2LQ9UBL3 628 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 PCDHB4Q9Y5E5 795 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 PCDHA9Q9Y5H5 950 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 PCDHA8Q9Y5H6 950 aa6.28□□□□□ -1.4
LINC00888-204ENST00000487386 KRIT1O00522 736 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 MAFKO60675 156 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 CRTAMO95727 393 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 ZSCAN22P10073 491 aaPredicted RBP6.27□□□□□ -1.41
LINC00888-204ENST00000487386 COL6A2P12110 1019 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 NAT1P18440 290 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 GUCY1A3Q02108 690 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 SPIRE1Q08AE8 756 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 CR1LQ2VPA4 569 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 MTDHQ86UE4 582 aaKnown RBP6.27□□□□□ -1.41
LINC00888-204ENST00000487386 NLGN1Q8N2Q7 840 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 FAM26EQ8N5C1 309 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 LINC00482Q8N8I6 264 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 FNIP1Q8TF40 1166 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 SCLYQ96I15 445 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 RNPC3Q96LT9 517 aaKnown RBP6.27□□□□□ -1.41
LINC00888-204ENST00000487386 TMEM260Q9NX78 707 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 HSPBP1Q9NZL4 362 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 MYOTQ9UBF9 498 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 FAN1Q9Y2M0 1017 aa6.27□□□□□ -1.41
LINC00888-204ENST00000487386 TCRBV5S4A2TA0A5A2 114 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 PLD2O14939 933 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 SLC27A2O14975 620 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 NKRFO15226 690 aaKnown RBP eCLIP6.26□□□□□ -1.41
LINC00888-204ENST00000487386 GNAT1P11488 350 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 AFF3P51826 1226 aaKnown RBP6.26□□□□□ -1.41
LINC00888-204ENST00000487386 DLX2Q07687 328 aaPredicted RBP6.26□□□□□ -1.41
LINC00888-204ENST00000487386 VWA3BQ502W6 1294 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 TCERG1LQ5VWI1 586 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 SPOCD1Q6ZMY3 1216 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 TTLL11Q8NHH1 800 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 CLEC4DQ8WXI8 215 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 NOX5Q96PH1 765 aa6.26□□□□□ -1.41
LINC00888-204ENST00000487386 PCDH18Q9HCL0 1135 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms