RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ADAM9Q13443 819 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 RBBP5Q15291 538 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 STXBP4Q6ZWJ1 553 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SYNE4Q8N205 404 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SGSM3Q96HU1 749 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SUDS3Q9H7L9 328 aaPredicted RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 RIC8AQ9NPQ8 531 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 PARP2Q9UGN5 583 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARMCX3Q9UH62 379 aaPredicted RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 PREX1Q8TCU6 1659 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CLTCQ00610 1675 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 GRID2IPA4D2P6 1211 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CCDC188H7C350 402 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 MYBL2P10244 700 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 XRCC5P13010 732 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 STAT1P42224 750 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 DYNLL1P63167 89 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZBTB16Q05516 673 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 HS2ST1Q7LGA3 356 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 TMC4Q7Z404 712 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 NBPF5PQ86XG9 351 aaPredicted RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 TEX11Q8IYF3 940 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 NEK9Q8TD19 979 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CCHCR1Q8TD31 782 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 AENQ8WTP8 325 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 THOC1Q96FV9 657 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 DDX47Q9H0S4 455 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CTTNBP2NLQ9P2B4 639 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 TTC36A6NLP5 189 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 FANCGO15287 622 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SPOPO43791 374 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 PLEKP08567 350 aaPredicted RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 GOLGA8HP0CJ92 632 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 TMOD1P28289 359 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 AMPD2Q01433 879 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 LRRC63Q05C16 580 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CCDC38Q502W7 563 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CYB5D1Q6P9G0 228 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 PPFIBP2Q8ND30 876 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CHMP6Q96FZ7 201 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 UIMC1Q96RL1 719 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 LZTS2Q9BRK4 669 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 VCPKMTQ9H867 229 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARPP21Q9UBL0 812 aaPredicted RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 ASIC3Q9UHC3 531 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 FBXL5Q9UKA1 691 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 KLRF2D3W0D1 207 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 CPP00450 1065 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 FCER1AP12319 257 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 GCFC2P16383 781 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SLCO1A2P46721 670 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARMCX6Q7L4S7 300 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 NLRP10Q86W26 655 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 OR2W6PQ8NHA6 318 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SPDL1Q96EA4 605 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SEC16BQ96JE7 1060 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 EPB41L4AQ9HCS5 686 aaPredicted RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 PANK4Q9NVE7 773 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 ATP6V0A2Q9Y487 856 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 BZW2Q9Y6E2 419 aaKnown RBP8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SLIT1O75093 1534 aa8.38□□□□□ -1.07
COL6A4P1-202ENST00000487147 SPDYE3A6NKU9 549 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 SLMAPQ14BN4 828 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 CLUL1Q15846 466 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PFKFB3Q16875 520 aaPredicted RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 C6orf163Q5TEZ5 329 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 SAAL1Q96ER3 474 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 RAB3IPQ96QF0 476 aaPredicted RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 A0A087X0B3 334 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 LRRC10BA6NIK2 292 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PHF20L1A8MW92 1017 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PDE2AO00408 941 aaPredicted RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 RHOBTB3O94955 611 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 GSTO1P78417 241 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 MXRA7P84157 204 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PLCB4Q15147 1175 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 EXOC3L4Q17RC7 722 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 FAM83BQ5T0W9 1011 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 HAUS3Q68CZ6 603 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 ALKBH5Q6P6C2 394 aaKnown RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 DDX12PQ92771 950 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 VCXQ9H320 206 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 CALUO43852 315 aaPredicted RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PRPF6O94906 941 aaKnown RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PRLRP16471 622 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 STAG2Q8N3U4 1231 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 GIMAP8Q8ND71 665 aaPredicted RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 ZMYND12Q9H0C1 365 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 FAM217BQ9NTX9 383 aaPredicted RBP8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 CEP72Q9P209 647 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 PCDHB13Q9Y5F0 798 aa8.37□□□□□ -1.07
COL6A4P1-202ENST00000487147 LRRD1A4D1F6 860 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 ADCY7P51828 1080 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 MRPL12P52815 198 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 SKOR1P84550 965 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 STK4Q13043 487 aa8.36□□□□□ -1.07
COL6A4P1-202ENST00000487147 TAF11Q15544 211 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms