RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GINM1Q9NU53 330 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 KIAA1024Q9UPX6 916 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 PPP2R2CQ9Y2T4 447 aa22.71■■□□□ 1.23
HPS3-206ENST00000486530 ABCB11O95342 1321 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 A0A1W2PQC6 194 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 POTEB3A0JP26 581 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 POTECB2RU33 542 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 GCOM1H8Y6P7 765 aaPredicted RBP22.7■■□□□ 1.22
HPS3-206ENST00000486530 POLR2MP0CAP2 368 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 CASP14P31944 242 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 POTEBQ6S5H4 581 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 REXO1L1PQ8IX06 675 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 HPS3Q969F9 1004 aa22.7■■□□□ 1.22
HPS3-206ENST00000486530 CPLX3Q8WVH0 158 aa22.69■■□□□ 1.22
HPS3-206ENST00000486530 DNAJC19Q96DA6 116 aa22.69■■□□□ 1.22
HPS3-206ENST00000486530 FEZ1Q99689 392 aa22.69■■□□□ 1.22
HPS3-206ENST00000486530 GLIS2Q9BZE0 524 aaPredicted RBP22.69■■□□□ 1.22
HPS3-206ENST00000486530 DEFB129Q9H1M3 183 aa22.69■■□□□ 1.22
HPS3-206ENST00000486530 EHMT1Q9H9B1 1298 aa22.69■■□□□ 1.22
HPS3-206ENST00000486530 SRCAPQ6ZRS2 3230 aa22.69■■□□□ 1.22
HPS3-206ENST00000486530 CTIFO43310 598 aaKnown RBP22.68■■□□□ 1.22
HPS3-206ENST00000486530 CFBP00751 764 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 PLA2G4BP0C869 781 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 FECHP22830 423 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 ZNF76P36508 570 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 STAT3P40763 770 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 FOXR2Q6PJQ5 311 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 GPC2Q8N158 579 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 MB21D1Q8N884 522 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 CNOT6LQ96LI5 555 aaKnown RBP22.68■■□□□ 1.22
HPS3-206ENST00000486530 ZNF341Q9BYN7 854 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 SEMA6BQ9H3T3 888 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 GPRC5DQ9NZD1 345 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 MSH4O15457 936 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 MED24O75448 989 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 DNM2P50570 870 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 FXR1P51114 621 aaKnown RBP eCLIP22.68■■□□□ 1.22
HPS3-206ENST00000486530 COASYQ13057 564 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 ZNF507Q8TCN5 953 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 UIMC1Q96RL1 719 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 TUBGCP2Q9BSJ2 902 aa22.68■■□□□ 1.22
HPS3-206ENST00000486530 E9PMD0 336 aa22.67■■□□□ 1.22
HPS3-206ENST00000486530 FGFR1OPO95684 399 aaKnown RBP22.67■■□□□ 1.22
HPS3-206ENST00000486530 RPA1P27694 616 aa22.67■■□□□ 1.22
HPS3-206ENST00000486530 LRRC63Q05C16 580 aa22.67■■□□□ 1.22
HPS3-206ENST00000486530 NCAPH2Q6IBW4 605 aa22.67■■□□□ 1.22
HPS3-206ENST00000486530 TRPM4Q8TD43 1214 aa22.67■■□□□ 1.22
HPS3-206ENST00000486530 DOCK1Q14185 1865 aa22.67■■□□□ 1.22
HPS3-206ENST00000486530 SSBP05455 408 aaKnown RBP eCLIP22.66■■□□□ 1.22
HPS3-206ENST00000486530 PRKCSHP14314 528 aaPredicted RBP22.66■■□□□ 1.22
HPS3-206ENST00000486530 ETF1P62495 437 aaKnown RBP22.66■■□□□ 1.22
HPS3-206ENST00000486530 TOGARAM2Q6ZUX3 1019 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 CCDC65Q8IXS2 484 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 LPAR1Q92633 364 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 PANK4Q9NVE7 773 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 VAV3Q9UKW4 847 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 PHLPP2Q6ZVD8 1323 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 RBBP6Q7Z6E9 1792 aaKnown RBP22.66■■□□□ 1.22
HPS3-206ENST00000486530 DICER1Q9UPY3 1922 aaKnown RBP22.66■■□□□ 1.22
HPS3-206ENST00000486530 IGLV3-22A0A075B6J6 115 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 WDR46O15213 610 aaKnown RBP22.66■■□□□ 1.22
HPS3-206ENST00000486530 CCDC84Q86UT8 332 aaPredicted RBP22.66■■□□□ 1.22
HPS3-206ENST00000486530 GPBP1Q86WP2 473 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 ABHD10Q9NUJ1 306 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 FBXO28Q9NVF7 368 aa22.66■■□□□ 1.22
HPS3-206ENST00000486530 PITPNM2Q9BZ72 1349 aa22.65■■□□□ 1.22
HPS3-206ENST00000486530 PES1O00541 588 aaKnown RBP22.65■■□□□ 1.22
HPS3-206ENST00000486530 MTIF2P46199 727 aaKnown RBP22.65■■□□□ 1.22
HPS3-206ENST00000486530 FAM26FQ5R3K3 315 aa22.65■■□□□ 1.22
HPS3-206ENST00000486530 NBPF12Q5TAG4 269 aaPredicted RBP22.65■■□□□ 1.22
HPS3-206ENST00000486530 SYT10Q6XYQ8 523 aa22.65■■□□□ 1.22
HPS3-206ENST00000486530 LDHDQ86WU2 507 aa22.65■■□□□ 1.22
HPS3-206ENST00000486530 CATSPER3Q86XQ3 398 aa22.65■■□□□ 1.22
HPS3-206ENST00000486530 POTEFA5A3E0 1075 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 SOWAHDA6NJG2 315 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 CTNND1O60716 968 aaKnown RBP22.64■■□□□ 1.22
HPS3-206ENST00000486530 POTEIP0CG38 1075 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 EPS15P42566 896 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 SLC12A3P55017 1021 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 ANGEL2Q5VTE6 544 aaKnown RBP22.64■■□□□ 1.22
HPS3-206ENST00000486530 POTEGQ6S5H5 508 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 POTEEQ6S8J3 1075 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 MYOCDQ8IZQ8 938 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 KCTD17Q8N5Z5 321 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 TSG101Q99816 390 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 KIAA1683Q9H0B3 1180 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 SBF1O95248 1867 aa22.64■■□□□ 1.22
HPS3-206ENST00000486530 B4DLN1 442 aa22.64■■□□□ 1.21
HPS3-206ENST00000486530 ICAM1P05362 532 aa22.64■■□□□ 1.21
HPS3-206ENST00000486530 CCDC175P0C221 793 aa22.64■■□□□ 1.21
HPS3-206ENST00000486530 CYP11B2P19099 503 aa22.64■■□□□ 1.21
HPS3-206ENST00000486530 HIRAP54198 1017 aaPredicted RBP22.64■■□□□ 1.21
HPS3-206ENST00000486530 TMTC1Q8IUR5 882 aa22.64■■□□□ 1.21
HPS3-206ENST00000486530 CYP2W1Q8TAV3 490 aa22.64■■□□□ 1.21
HPS3-206ENST00000486530 TBC1D5Q92609 795 aa22.64■■□□□ 1.21
HPS3-206ENST00000486530 UTRNP46939 3433 aa22.63■■□□□ 1.21
HPS3-206ENST00000486530 SPATA31C1P0DKV0 1188 aa22.63■■□□□ 1.21
HPS3-206ENST00000486530 YBX3P16989 372 aaKnown RBP eCLIP22.63■■□□□ 1.21
HPS3-206ENST00000486530 TRIM65Q6PJ69 517 aa22.63■■□□□ 1.21
HPS3-206ENST00000486530 SLF1Q9BQI6 1058 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms