RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ETFBKMTQ8IXQ9 262 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 BADQ92934 168 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 DMRTB1Q96MA1 342 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 INSM2Q96T92 566 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-207ENST00000483407 FAM129BQ96TA1 746 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 HAUS7Q99871 368 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 TINF2Q9BSI4 451 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 PDLIM7Q9NR12 457 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 ARPP21Q9UBL0 812 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-207ENST00000483407 PPP1R9AQ9ULJ8 1098 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 ADAMTS5Q9UNA0 930 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 PHF24Q9UPV7 400 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 CNPY2Q9Y2B0 182 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 SLC4A4Q9Y6R1 1079 aa7.02□□□□□ -1.29
CSDE1-207ENST00000483407 ZBED9Q6R2W3 1325 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 CYP2D7A0A087X1C5 515 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 SPATA31C2B4DYI2 1134 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 VWA5AO00534 786 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 PGK1P00558 417 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 PGK2P07205 417 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 CLTBP09497 229 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 RAG1P15918 1043 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 VAMP1P23763 118 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 TXLNAP40222 546 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 TLE2Q04725 743 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 DSC3Q14574 896 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 ZNF792Q3KQV3 632 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 C4orf17Q53FE4 359 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 GNASQ5JWF2 1037 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 C9orf50Q5SZB4 431 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 MSL3Q8N5Y2 521 aaKnown RBP7.01□□□□□ -1.29
CSDE1-207ENST00000483407 NUP133Q8WUM0 1156 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 DDX11Q96FC9 970 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 IFT43Q96FT9 208 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 RNPC3Q96LT9 517 aaKnown RBP7.01□□□□□ -1.29
CSDE1-207ENST00000483407 CDX2Q99626 313 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-207ENST00000483407 COL25A1Q9BXS0 654 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-207ENST00000483407 TEX13BQ9BXU2 312 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 SEMA6BQ9H3T3 888 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 FBXO28Q9NVF7 368 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 KLK14Q9P0G3 267 aa7.01□□□□□ -1.29
CSDE1-207ENST00000483407 CTDP1Q9Y5B0 961 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-207ENST00000483407 MYH1P12882 1939 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 ROBO3Q96MS0 1386 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 ZNF236Q9UL36 1845 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 TMEM265A0A087WTH1 108 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 A0A1W2PQ45 241 aaPredicted RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 A0A1W2PQY0 241 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 TRIM43BA6NCK2 446 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 DCDC2CA8MYV0 355 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 CAPN5O15484 640 aaPredicted RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 PQBP1O60828 265 aaKnown RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 P4HBP07237 508 aaKnown RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 FOSL2P15408 326 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 MZF1P28698 734 aaPredicted RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 FAM83BQ5T0W9 1011 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 SNRNP48Q6IEG0 339 aaKnown RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 CTR9Q6PD62 1173 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 ATCAYQ86WG3 371 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 GJD3Q8N144 294 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 MAFAQ8NHW3 353 aaPredicted RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 TRIM43Q96BQ3 446 aaPredicted RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 ALKBH8Q96BT7 664 aaKnown RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 SLF1Q9BQI6 1058 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 LRRCC1Q9C099 1032 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 MKNK2Q9HBH9 465 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 SPC25Q9HBM1 224 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 ZNF287Q9HBT7 754 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 STARD7Q9NQZ5 370 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 ZBTB40Q9NUA8 1239 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 TMEM39AQ9NV64 488 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 ZDHHC3Q9NYG2 299 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 ZNF214Q9UL59 606 aaPredicted RBP7□□□□□ -1.29
CSDE1-207ENST00000483407 FAM184BQ9ULE4 1060 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 CDK5RAP2Q96SN8 1893 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 SYNGAP1Q96PV0 1343 aa7□□□□□ -1.29
CSDE1-207ENST00000483407 SPTBN5Q9NRC6 3674 aaKnown RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 F5H6K3 240 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 KIAA0355O15063 1070 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 ZBED4O75132 1171 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 ADAMTS4O75173 837 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 UPP2O95045 317 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 ZNF865P0CJ78 1059 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 TAL1P17542 331 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 CTSOP43234 321 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 PLCB3Q01970 1234 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 FPGSQ05932 587 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 KLRC3Q07444 240 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 SBK1Q52WX2 424 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 GIMAP6Q6P9H5 292 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 CCDC174Q6PII3 467 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 ANKRD33Q7Z3H0 272 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 SIRT2Q8IXJ6 389 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 PRPF38AQ8NAV1 312 aaKnown RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 PCSK9Q8NBP7 692 aaKnown RBP6.99□□□□□ -1.29
CSDE1-207ENST00000483407 REPS2Q8NFH8 660 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 MYLIPQ8WY64 445 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 GPATCH3Q96I76 525 aa6.99□□□□□ -1.29
CSDE1-207ENST00000483407 GLT1D1Q96MS3 346 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms