RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 ZNF589Q86UQ0 364 aaPredicted RBP10.6□□□□□ -0.71
HLA-B-253ENST00000481849 PCSK9Q8NBP7 692 aaKnown RBP10.6□□□□□ -0.71
HLA-B-253ENST00000481849 TMEM47Q9BQJ4 181 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 PPP1R12CQ9BZL4 782 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 KATNBL1Q9H079 304 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 PDGFCQ9NRA1 345 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 STK17AQ9UEE5 414 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 ANAPC4Q9UJX5 808 aa10.6□□□□□ -0.71
HLA-B-253ENST00000481849 COL11A1P12107 1806 aaPredicted RBP10.6□□□□□ -0.71
HLA-B-253ENST00000481849 ASTN1O14525 1302 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 DNAH12Q6ZR08 3092 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 ASB14A6NK59 587 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 SPTLC1O15269 473 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 ORC4O43929 436 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
HLA-B-253ENST00000481849 BMP1P13497 986 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 CST5P28325 142 aaPredicted RBP10.59□□□□□ -0.71
HLA-B-253ENST00000481849 ALX1Q15699 326 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 TKFCQ3LXA3 575 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 LYPD8Q6UX82 237 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 FBXO16Q8IX29 292 aaPredicted RBP10.59□□□□□ -0.71
HLA-B-253ENST00000481849 DCAF4Q8WV16 495 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 UPF3AQ9H1J1 476 aaKnown RBP10.59□□□□□ -0.71
HLA-B-253ENST00000481849 SEMA6BQ9H3T3 888 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 CYP39A1Q9NYL5 469 aa10.59□□□□□ -0.71
HLA-B-253ENST00000481849 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.71
HLA-B-253ENST00000481849 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
HLA-B-253ENST00000481849 PTPDC1A2A3K4 754 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 ARVCFO00192 962 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 CTAGE5O15320 804 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 DYNC1LI2O43237 492 aaPredicted RBP10.58□□□□□ -0.72
HLA-B-253ENST00000481849 PLA2G6O60733 806 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 TIMP1P01033 207 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 TOP1P11387 765 aaKnown RBP10.58□□□□□ -0.72
HLA-B-253ENST00000481849 INSM1Q01101 510 aaPredicted RBP10.58□□□□□ -0.72
HLA-B-253ENST00000481849 BAATQ14032 418 aaPredicted RBP10.58□□□□□ -0.72
HLA-B-253ENST00000481849 CSPP1Q1MSJ5 1256 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 SYDE2Q5VT97 1194 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 CXCL17Q6UXB2 119 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 TLK2Q86UE8 772 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 TBC1D10CQ8IV04 446 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 MYLIPQ8WY64 445 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 TOX2Q96NM4 488 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 ZKSCAN3Q9BRR0 538 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 AP5M1Q9H0R1 490 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 RANBP17Q9H2T7 1088 aaKnown RBP10.58□□□□□ -0.72
HLA-B-253ENST00000481849 TTYH1Q9H313 450 aaPredicted RBP10.58□□□□□ -0.72
HLA-B-253ENST00000481849 TBX21Q9UL17 535 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 ELP1O95163 1332 aa10.58□□□□□ -0.72
HLA-B-253ENST00000481849 ACACBO00763 2458 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 LTBP2Q14767 1821 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 CFAP99D6REC4 459 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 NFIBO00712 420 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 TLR3O15455 904 aaKnown RBP10.57□□□□□ -0.72
HLA-B-253ENST00000481849 IGHDP01880 384 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 ICAM1P05362 532 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 FGRP09769 529 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 GOLGA8HP0CJ92 632 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 ACRP10323 421 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 SDSP20132 328 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 CALML3P27482 149 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 NOVP48745 357 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 CDK7P50613 346 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 PSMC6P62333 389 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 SMAD3P84022 425 aaKnown RBP10.57□□□□□ -0.72
HLA-B-253ENST00000481849 FSCN1Q16658 493 aaKnown RBP10.57□□□□□ -0.72
HLA-B-253ENST00000481849 MFSD6Q6ZSS7 791 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 KIAA1211Q6ZU35 1233 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.57□□□□□ -0.72
HLA-B-253ENST00000481849 RWDD1Q9H446 243 aaPredicted RBP10.57□□□□□ -0.72
HLA-B-253ENST00000481849 GNEQ9Y223 722 aaKnown RBP10.57□□□□□ -0.72
HLA-B-253ENST00000481849 ZNF292O60281 2723 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 NEDD4P46934 1319 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 MROH7Q68CQ1 1323 aa10.57□□□□□ -0.72
HLA-B-253ENST00000481849 CSF2RAP15509 400 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 CYP2C18P33260 490 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 AKNAD1Q5T1N1 836 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 MFSD5Q6N075 450 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 TAPT1Q6NXT6 567 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 CWC27Q6UX04 472 aaKnown RBP10.56□□□□□ -0.72
HLA-B-253ENST00000481849 SLC30A10Q6XR72 485 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 TRIM46Q7Z4K8 759 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 CHD1LQ86WJ1 897 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 FAM126BQ8IXS8 530 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 USP38Q8NB14 1042 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 EXOC6Q8TAG9 804 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 FAM174AQ8TBP5 190 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 CPVLQ9H3G5 476 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 TCP11L1Q9NUJ3 509 aa10.56□□□□□ -0.72
HLA-B-253ENST00000481849 GRXCR1A8MXD5 290 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 ZNF213O14771 459 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 PDHBP11177 359 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 FOSL2P15408 326 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 ALDH5A1P51649 535 aaPredicted RBP10.55□□□□□ -0.72
HLA-B-253ENST00000481849 ZNF543Q08ER8 600 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 NNTQ13423 1086 aa10.55□□□□□ -0.72
HLA-B-253ENST00000481849 PPIGQ13427 754 aaKnown RBP eCLIP10.55□□□□□ -0.72
HLA-B-253ENST00000481849 ITGA7Q13683 1181 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms