RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 FEM1BQ9UK73 627 aa20.54■□□□□ 0.88
MRPL28-209ENST00000481453 MRFAP1Q9Y605 127 aa20.54■□□□□ 0.88
MRPL28-209ENST00000481453 MARCH6O60337 910 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 PDE4DQ08499 809 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 SPIRE1Q08AE8 756 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 STK4Q13043 487 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 KIF4BQ2VIQ3 1234 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 PRR16Q569H4 304 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 MRPL44Q9H9J2 332 aaKnown RBP20.53■□□□□ 0.88
MRPL28-209ENST00000481453 EXOC1Q9NV70 894 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 LIMA1Q9UHB6 759 aaKnown RBP20.53■□□□□ 0.88
MRPL28-209ENST00000481453 FHOD1Q9Y613 1164 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 CYP3A4P08684 503 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 FCER1AP12319 257 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 PPP2R3AQ06190 1150 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 KRT31Q15323 416 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 CNNM4Q6P4Q7 775 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 RAD9BQ6WBX8 426 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 IRF2BP1Q8IU81 584 aa20.53■□□□□ 0.88
MRPL28-209ENST00000481453 LRRC10BA6NIK2 292 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 MFAP3LO75121 409 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 INPP5BP32019 993 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 TRAF1Q13077 416 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 TTI2Q6NXR4 508 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 TEX2Q8IWB9 1127 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 SLFN12Q8IYM2 578 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 DEFB129Q9H1M3 183 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 ADGRG1Q9Y653 693 aa20.52■□□□□ 0.88
MRPL28-209ENST00000481453 TBX3O15119 743 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 CASP14P31944 242 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 STAT3P40763 770 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 KIAA0895Q8NCT3 520 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 HPS3Q969F9 1004 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 LZTFL1Q9NQ48 299 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 PNMA6AP0CW24 399 aaPredicted RBP20.51■□□□□ 0.87
MRPL28-209ENST00000481453 CCT6AP40227 531 aaKnown RBP20.51■□□□□ 0.87
MRPL28-209ENST00000481453 TERF2Q15554 542 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 COBLL1Q53SF7 1204 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 TCP11X2Q5H9J9 407 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 NBPF12Q5TAG4 269 aaPredicted RBP20.51■□□□□ 0.87
MRPL28-209ENST00000481453 CNGA4Q8IV77 575 aa20.51■□□□□ 0.87
MRPL28-209ENST00000481453 DHTKD1Q96HY7 919 aaPredicted RBP20.51■□□□□ 0.87
MRPL28-209ENST00000481453 H7C1D1 291 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 PSMA7O14818 248 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 CTNND1O60716 968 aaKnown RBP20.5■□□□□ 0.87
MRPL28-209ENST00000481453 STIM1Q13586 685 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 UNC13DQ70J99 1090 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 CYP2W1Q8TAV3 490 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 CCDC47Q96A33 483 aaKnown RBP20.5■□□□□ 0.87
MRPL28-209ENST00000481453 DUSP9Q99956 384 aaKnown RBP20.5■□□□□ 0.87
MRPL28-209ENST00000481453 IRX2Q9BZI1 471 aaPredicted RBP20.5■□□□□ 0.87
MRPL28-209ENST00000481453 KDM3AQ9Y4C1 1321 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 IGLV3-22A0A075B6J6 115 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 PVALEFA0A1B0GWK0 134 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 KCNJ18B7U540 433 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 N4BP3O15049 544 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 ZRANB2O95218 330 aaKnown RBP eCLIP20.5■□□□□ 0.87
MRPL28-209ENST00000481453 CFBP00751 764 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 EHHADHQ08426 723 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 DGKZQ13574 1117 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 KCNJ12Q14500 433 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 LDHDQ86WU2 507 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 UPF1Q92900 1129 aaKnown RBP eCLIP20.5■□□□□ 0.873e-25■■■■■ 56.4
MRPL28-209ENST00000481453 KIAA1683Q9H0B3 1180 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 GINM1Q9NU53 330 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 ZNF536O15090 1300 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 ITIH6Q6UXX5 1313 aa20.5■□□□□ 0.87
MRPL28-209ENST00000481453 DOCK1Q14185 1865 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 MSH4O15457 936 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 SLC26A4O43511 780 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 GYPCP04921 128 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 SPAG1Q07617 926 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 TEX35Q5T0J7 233 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 DYMQ7RTS9 669 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 GPR161Q8N6U8 529 aaKnown RBP20.49■□□□□ 0.87
MRPL28-209ENST00000481453 CCDC51Q96ER9 411 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 EPC1Q9H2F5 836 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 ST7Q9NRC1 585 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 MRPL11Q9Y3B7 192 aaKnown RBP20.49■□□□□ 0.87
MRPL28-209ENST00000481453 POTEB3A0JP26 581 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 POTECB2RU33 542 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 GCOM1H8Y6P7 765 aaPredicted RBP20.49■□□□□ 0.87
MRPL28-209ENST00000481453 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
MRPL28-209ENST00000481453 MED24O75448 989 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 POLR2MP0CAP2 368 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
MRPL28-209ENST00000481453 POTEBQ6S5H4 581 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 SAMD1Q6SPF0 538 aaPredicted RBP20.49■□□□□ 0.87
MRPL28-209ENST00000481453 ANKRD20A12PQ8NF67 263 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 DDX12PQ92771 950 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 NT5C3AQ9H0P0 336 aa20.49■□□□□ 0.87
MRPL28-209ENST00000481453 ABCB11O95342 1321 aa20.48■□□□□ 0.87
MRPL28-209ENST00000481453 KIF5CO60282 957 aa20.48■□□□□ 0.87
MRPL28-209ENST00000481453 CCNE1P24864 410 aa20.48■□□□□ 0.87
MRPL28-209ENST00000481453 FXR1P51114 621 aaKnown RBP eCLIP20.48■□□□□ 0.87
MRPL28-209ENST00000481453 CREBRFQ8IUR6 639 aa20.48■□□□□ 0.87
MRPL28-209ENST00000481453 LPAR1Q92633 364 aa20.48■□□□□ 0.87
MRPL28-209ENST00000481453 P2RX5Q93086 422 aa20.48■□□□□ 0.87
MRPL28-209ENST00000481453 DNAJC19Q96DA6 116 aa20.48■□□□□ 0.87
MRPL28-209ENST00000481453 FAM20AQ96MK3 541 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms