RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 EFCAB14O75071 495 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 FSHBP01225 129 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 HOXC12P31275 282 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 ARL4AP40617 200 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 MAGEA10P43363 369 aaPredicted RBP4.97□□□□□ -1.61
NF1-209ENST00000479536 LIMS1P48059 325 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 GFRA1P56159 465 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 PCBP3P57721 371 aaKnown RBP4.97□□□□□ -1.61
NF1-209ENST00000479536 MAP4K2Q12851 820 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 GRB10Q13322 594 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 NTRK3Q16288 839 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 BRAPQ7Z569 592 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 PPM1KQ8N3J5 372 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 AFAP1L2Q8N4X5 818 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 GSTCDQ8NEC7 633 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 ENOX1Q8TC92 643 aaKnown RBP4.97□□□□□ -1.61
NF1-209ENST00000479536 DDX1Q92499 740 aaKnown RBP4.97□□□□□ -1.61
NF1-209ENST00000479536 TCTN2Q96GX1 697 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 CCDC140Q96MF4 163 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 ZDHHC15Q96MV8 337 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 CEP89Q96ST8 783 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 HDAC8Q9BY41 377 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 NKX2-4Q9H2Z4 354 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 MCM8Q9UJA3 840 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 TAF6LQ9Y6J9 622 aa4.97□□□□□ -1.61
NF1-209ENST00000479536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.96□□□□□ -1.62
NF1-209ENST00000479536 FAM83GA6ND36 823 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 ALG1L2C9J202 215 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 SNRPB2P08579 225 aaKnown RBP4.96□□□□□ -1.62
NF1-209ENST00000479536 PMLP29590 882 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 KCNJ6P48051 423 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 AMPD2Q01433 879 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 BRDTQ58F21 947 aaPredicted RBP4.96□□□□□ -1.62
NF1-209ENST00000479536 ODR4Q5SWX8 454 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 NT5DC1Q5TFE4 455 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 GALNT18Q6P9A2 607 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 DDX46Q7L014 1031 aaKnown RBP4.96□□□□□ -1.62
NF1-209ENST00000479536 TMC3Q7Z5M5 1100 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 FGD2Q7Z6J4 655 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 ADGRG2Q8IZP9 1017 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 AHI1Q8N157 1196 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 TMEM145Q8NBT3 493 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 SLC16A11Q8NCK7 471 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 ATL2Q8NHH9 583 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 PTPRN2Q92932 1015 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 C1orf159Q96HA4 380 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 DSCC1Q9BVC3 393 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 CYP26B1Q9NR63 512 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 CHPF2Q9P2E5 772 aa4.96□□□□□ -1.62
NF1-209ENST00000479536 GPR55Q9Y2T6 319 aaPredicted RBP4.96□□□□□ -1.62
NF1-209ENST00000479536 SF3B6Q9Y3B4 125 aaKnown RBP4.96□□□□□ -1.62
NF1-209ENST00000479536 TNPO3Q9Y5L0 923 aaKnown RBP4.96□□□□□ -1.62
NF1-209ENST00000479536 A0A1B0GTL3 188 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 MEIS1O00470 390 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 MATN3O15232 486 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 SIGLEC6O43699 453 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 VAMP4O75379 141 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 CPP00450 1065 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 ASLP04424 464 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 SCG5P05408 212 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 SYPP08247 313 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 POU3F2P20265 443 aaPredicted RBP4.95□□□□□ -1.62
NF1-209ENST00000479536 ECI1P42126 302 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 ADAM17P78536 824 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 EXOSC10Q01780 885 aaKnown RBP4.95□□□□□ -1.62
NF1-209ENST00000479536 LAPTM5Q13571 262 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 FAM50AQ14320 339 aaKnown RBP4.95□□□□□ -1.62
NF1-209ENST00000479536 ZNF460Q14592 562 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 PRSS53Q2L4Q9 553 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 HSF5Q4G112 596 aaPredicted RBP4.95□□□□□ -1.62
NF1-209ENST00000479536 SLC35F1Q5T1Q4 408 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 CCDC181Q5TID7 509 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 WWC2Q6AWC2 1192 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 MAMDC2Q7Z304 686 aaPredicted RBP4.95□□□□□ -1.62
NF1-209ENST00000479536 STRA8Q7Z7C7 330 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 DAGLBQ8NCG7 672 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 LEO1Q8WVC0 666 aaPredicted RBP4.95□□□□□ -1.62
NF1-209ENST00000479536 JDP2Q8WYK2 163 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 SCLYQ96I15 445 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 SPATA25Q9BR10 227 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 CHST7Q9NS84 486 aa4.95□□□□□ -1.62
NF1-209ENST00000479536 WTIPA6NIX2 430 aaPredicted RBP4.94□□□□□ -1.62
NF1-209ENST00000479536 H0Y8X5 98 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 OPA1O60313 960 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 NPTXRO95502 500 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 PRAMEF1O95521 474 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 EYA4O95677 639 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 CPEP16870 476 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 PRKCAP17252 672 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 PFKLP17858 780 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 NEK4P51957 841 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 CYP4F8P98187 520 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 CAP1Q01518 475 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 CYP4F3Q08477 520 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 PCBP1Q15365 356 aaKnown RBP eCLIP4.94□□□□□ -1.62
NF1-209ENST00000479536 DPY19L1Q2PZI1 675 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 PKN3Q6P5Z2 889 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 USP53Q70EK8 1073 aa4.94□□□□□ -1.62
NF1-209ENST00000479536 ZNF655Q8N720 491 aaPredicted RBP4.94□□□□□ -1.62
NF1-209ENST00000479536 MAGEB10Q96LZ2 347 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms