RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ANKRD13AQ8IZ07 590 aa7.28□□□□□ -1.24
SF3B1-209ENST00000479532 TEPSINQ96N21 525 aa7.28□□□□□ -1.24
SF3B1-209ENST00000479532 WRNIP1Q96S55 665 aa7.28□□□□□ -1.24
SF3B1-209ENST00000479532 RNF41Q9H4P4 317 aaPredicted RBP7.28□□□□□ -1.24
SF3B1-209ENST00000479532 MKNK2Q9HBH9 465 aa7.28□□□□□ -1.24
SF3B1-209ENST00000479532 PICK1Q9NRD5 415 aa7.28□□□□□ -1.24
SF3B1-209ENST00000479532 USP20Q9Y2K6 914 aa7.28□□□□□ -1.24
SF3B1-209ENST00000479532 RNF114Q9Y508 228 aa7.28□□□□□ -1.24
SF3B1-209ENST00000479532 ATAD5Q96QE3 1844 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 A6NHS1 94 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 EPB41L2O43491 1005 aaKnown RBP7.27□□□□□ -1.25
SF3B1-209ENST00000479532 FGAP02671 866 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 ARSDP51689 593 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 HUNKP57058 714 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 C1QTNF8P60827 252 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 NRG1Q02297 640 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-209ENST00000479532 ADGRE1Q14246 886 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 MBTPS1Q14703 1052 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 MAP3K11Q16584 847 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 VPS53Q5VIR6 699 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 C16orf86Q6ZW13 317 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 MIGA2Q7L4E1 593 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 ZNF444Q8N0Y2 327 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-209ENST00000479532 TTC16Q8NEE8 873 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 PIK3R5Q8WYR1 880 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 CCDC17Q96LX7 622 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 MAP7D2Q96T17 732 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 UPF2Q9HAU5 1272 aaKnown RBP7.27□□□□□ -1.25
SF3B1-209ENST00000479532 EPB41L4AQ9HCS5 686 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-209ENST00000479532 CABP5Q9NP86 173 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 TOMM22Q9NS69 142 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 GINM1Q9NU53 330 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 ROBO3Q96MS0 1386 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 DOCK1Q14185 1865 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 SIPA1L1O43166 1804 aa7.27□□□□□ -1.25
SF3B1-209ENST00000479532 OTOFQ9HC10 1997 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 SSC5DA1L4H1 1573 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 MPHOSPH10O00566 681 aaKnown RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 CTNND1O60716 968 aaKnown RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 USP2O75604 605 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 RPLP1P05386 114 aaKnown RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 ASNSP08243 561 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 CYP2D6P10635 497 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 ZKSCAN1P17029 563 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 INPP5BP32019 993 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 CDK8P49336 464 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 PLCD1P51178 756 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 TRDNQ13061 729 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 CERKLQ49MI3 558 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 CST9Q5W186 159 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 MFSD6Q6ZSS7 791 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 METTL16Q86W50 562 aaKnown RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 HHIPL1Q96JK4 782 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 CNNM2Q9H8M5 875 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 AS3MTQ9HBK9 375 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 ANAPC4Q9UJX5 808 aa7.26□□□□□ -1.25
SF3B1-209ENST00000479532 RBM8AQ9Y5S9 174 aaKnown RBP7.26□□□□□ -1.25
SF3B1-209ENST00000479532 ARID1BQ8NFD5 2236 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 CYP2D7A0A087X1C5 515 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 PNMA6FA0A0J9YX94 578 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 TSPY2A6NKD2 308 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 UBE2Q2LH0YL09 131 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 HSP90AA1P07900 732 aaKnown RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 TSPY3P0CV98 308 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 TSPY8P0CW00 308 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 HSPA6P17066 643 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 CAP2P40123 477 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 ECE1P42892 770 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 ZNF157P51786 506 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 HAND2P61296 217 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 ATP2B2Q01814 1243 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 PTH1RQ03431 593 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 GABPAQ06546 454 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 ORC1Q13415 861 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 VGLL4Q14135 290 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 ABCB5Q2M3G0 1257 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 RRP12Q5JTH9 1297 aaKnown RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 NOL9Q5SY16 702 aaKnown RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 AKNAD1Q5T1N1 836 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 L1TD1Q5T7N2 865 aaKnown RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 TATDN1Q6P1N9 297 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 DLK2Q6UY11 383 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 RALYLQ86SE5 291 aaKnown RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 SYT9Q86SS6 491 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 SAPCD2Q86UD0 394 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 SCYL3Q8IZE3 742 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 STAG1Q8WVM7 1258 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 MAP4K1Q92918 833 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 DYNLL2Q96FJ2 89 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 KRT23Q9C075 422 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 LSG1Q9H089 658 aaKnown RBP7.25□□□□□ -1.25
SF3B1-209ENST00000479532 PDCL3Q9H2J4 239 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 MARK1Q9P0L2 795 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 ZNF112Q9UJU3 913 aa7.25□□□□□ -1.25
SF3B1-209ENST00000479532 FOXP2O15409 715 aa7.24□□□□□ -1.25
SF3B1-209ENST00000479532 RANBP6O60518 1105 aaKnown RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 PRPF40AO75400 957 aaKnown RBP7.24□□□□□ -1.25
SF3B1-209ENST00000479532 TPM2P07951 284 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms