RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 HAS3O00219 553 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 PRDM1O75626 825 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 MMP1P03956 469 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 ICAM1P05362 532 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 RSPH10BP0C881 870 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 ATF7P17544 494 aaPredicted RBP8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 CASTP20810 708 aaKnown RBP8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 SLC1A4P43007 532 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 PDE4BQ07343 736 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 ARHGAP1Q07960 439 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 PDE4DQ08499 809 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 ZNF444Q8N0Y2 327 aaPredicted RBP8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 STK11IPQ8N1F8 1099 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 FIBCD1Q8N539 461 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 EFHBQ8N7U6 833 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 SUSD6Q92537 303 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 OSBPL7Q9BZF2 842 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 PUS7LQ9H0K6 701 aaKnown RBP8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 PLAGL2Q9UPG8 496 aa8.71□□□□□ -1.02
SPTLC1-205ENST00000477888 ZNF292O60281 2723 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 PTPDC1A2A3K4 754 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 GSG1L2A8MUP6 293 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 GLP2RO95838 553 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 DNAJB1P25685 340 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 THPOP40225 353 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 PSEN2P49810 448 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 IKQ13123 557 aaPredicted RBP8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 DGKDQ16760 1214 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 LY6KQ17RY6 165 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 RCSD1Q6JBY9 416 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 GIMAP6Q6P9H5 292 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 KCTD1Q719H9 257 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 ADGRD2Q7Z7M1 963 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 SERINC5Q86VE9 423 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 NEDD1Q8NHV4 660 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 CLEC4DQ8WXI8 215 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 SEPT8Q92599 483 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 CLUAP1Q96AJ1 413 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 STRBPQ96SI9 672 aaKnown RBP8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 PLVAPQ9BX97 442 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 RC3H2Q9HBD1 1191 aaKnown RBP8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 BARX2Q9UMQ3 279 aaPredicted RBP8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 RWDD3Q9Y3V2 267 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 PCDHGC5Q9Y5F6 944 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 CHD8Q9HCK8 2581 aa8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 EP300Q09472 2414 aaPredicted RBP8.7□□□□□ -1.02
SPTLC1-205ENST00000477888 MINDY4BA8MYZ0 360 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 IPO8O15397 1037 aaKnown RBP8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 ABCB7O75027 752 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 F2P00734 622 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 GH1P01241 217 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 CALML3P27482 149 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 RPS6P62753 249 aaKnown RBP8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 PUM1Q14671 1186 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 MFSD10Q14728 455 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 KIAA0753Q2KHM9 967 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 ASTLQ6HA08 431 aaPredicted RBP8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 SLC30A10Q6XR72 485 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 RNF207Q6ZRF8 634 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 HOMEZQ8IX15 550 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 DNERQ8NFT8 737 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 SPPL3Q8TCT6 385 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 ALG1Q9BT22 464 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 RANBP17Q9H2T7 1088 aaKnown RBP8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 IL1RAPL2Q9NP60 686 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 PAG1Q9NWQ8 432 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 DLL3Q9NYJ7 618 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 ISY1Q9ULR0 285 aaKnown RBP8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 EXOC6BQ9Y2D4 811 aa8.69□□□□□ -1.02
SPTLC1-205ENST00000477888 GREB1LQ9C091 1923 aaPredicted RBP8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 CSPG5O95196 566 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 NRIP1P48552 1158 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 RASGRP2Q7LDG7 609 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 CHST3Q7LGC8 479 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 ERC1Q8IUD2 1116 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 UBALD2Q8IYN6 164 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 TMEM57Q8N5G2 664 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 KREMEN2Q8NCW0 462 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 ATP8B4Q8TF62 1192 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 P2RX5Q93086 422 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 PPP2R3CQ969Q6 453 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 EMID1Q96A84 441 aaPredicted RBP8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 ZNF689Q96CS4 500 aaPredicted RBP8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 MPHOSPH6Q99547 160 aaKnown RBP8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 KATNAL1Q9BW62 490 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 ZNF287Q9HBT7 754 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 PLIN4Q96Q06 1357 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 ACACBO00763 2458 aa8.68□□□□□ -1.02
SPTLC1-205ENST00000477888 BRD1O95696 1058 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 ITGB1P05556 798 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 TSPY3P0CV98 308 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 TSPY8P0CW00 308 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 HOXC8P31273 242 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 CLCN5P51795 746 aa8.67□□□□□ -1.02
SPTLC1-205ENST00000477888 RBM10P98175 930 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms