RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 COASYQ13057 564 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 LRRC41Q15345 812 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 ERCC6LQ2NKX8 1250 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 MIIPQ5JXC2 388 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 KIAA1755Q5JYT7 1200 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 POTEBQ6S5H4 581 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 OGFOD1Q8N543 542 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 MNS1Q8NEH6 495 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 ETNPPLQ8TBG4 499 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 ACER1Q8TDN7 264 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 DNAJC19Q96DA6 116 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 DNAJC7Q99615 494 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 CHP1Q99653 195 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 CARD6Q9BX69 1037 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 BMP2KQ9NSY1 1161 aaPredicted RBP12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 PANK4Q9NVE7 773 aa12.27□□□□□ -0.44
HLA-DMB-260ENST00000477537 CNTNAP1P78357 1384 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 SLC26A4O43511 780 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 MED24O75448 989 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 PLA2G4BP0C869 781 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 HOXA13P31271 388 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 SREBF1P36956 1147 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 KLK7P49862 253 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 TSR1Q2NL82 804 aaKnown RBP12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 Q4G0T1 1027 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 GPBP1Q86WP2 473 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 GLIS3Q8NEA6 775 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 ZNF397Q8NF99 534 aaPredicted RBP12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 TSG101Q99816 390 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 SLF1Q9BQI6 1058 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 NUP58Q9BVL2 599 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 ZBTB21Q9ULJ3 1066 aa12.27□□□□□ -0.45
HLA-DMB-260ENST00000477537 RASSF10A6NK89 507 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 OPLAHO14841 1288 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 FGFR1OPO95684 399 aaKnown RBP12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 TRIM21P19474 475 aaKnown RBP12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 STAT2P52630 851 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 MAP3K9P80192 1104 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 LRRC63Q05C16 580 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 ARHGAP29Q52LW3 1261 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 FKBP15Q5T1M5 1219 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 MYOCDQ8IZQ8 938 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 CNKSR2Q8WXI2 1034 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 TMX2Q9Y320 296 aa12.26□□□□□ -0.45
HLA-DMB-260ENST00000477537 NPHP3-ACAD11A0A0J9YXS1 232 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 FAM86B1E9PN63 330 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 TBX3O15119 743 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 FAM86B2P0C5J1 330 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 VWA3BQ502W6 1294 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 ZNF569Q5MCW4 686 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 FAM26FQ5R3K3 315 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 CCDC65Q8IXS2 484 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 NIM1KQ8IY84 436 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 RETREG2Q8NC44 543 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 ERMNQ8TAM6 284 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 LENG9Q96B70 501 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 ERGIC2Q96RQ1 377 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 TTYH3Q9C0H2 523 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 TMEM39BQ9GZU3 492 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 AGPAT5Q9NUQ2 364 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 TBC1D7Q9P0N9 293 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 MRFAP1Q9Y605 127 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 EPN1Q9Y6I3 576 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 TADA3O75528 432 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 NDUFA10O95299 355 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 KRT18P05783 430 aaKnown RBP12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 SPIRE1Q08AE8 756 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 CCDC174Q6PII3 467 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 FBXO38Q6PIJ6 1188 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 POTEGQ6S5H5 508 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 POTEEQ6S8J3 1075 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 LRRC55Q6ZSA7 311 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 UBE2Q2Q8WVN8 375 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 ZNRF3Q9ULT6 936 aa12.25□□□□□ -0.45
HLA-DMB-260ENST00000477537 ABL1P00519 1130 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 CYP11B2P19099 503 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 CIITAP33076 1130 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 ZNF76P36508 570 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 ARHGAP25P42331 645 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 SLC12A3P55017 1021 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 ZBED6P86452 979 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 RASSF7Q02833 373 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 PPP2R3AQ06190 1150 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 RAD51AP2Q09MP3 1159 aa12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 ZYXQ15942 572 aaKnown RBP12.24□□□□□ -0.45
HLA-DMB-260ENST00000477537 MAN2A1Q16706 1144 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms