RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 KCNMA1Q12791 1236 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 SEPT2Q15019 361 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 DOK7Q18PE1 504 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 HHIPL2Q6UWX4 724 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 MLXIPQ9HAP2 919 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 ADAM21Q9UKJ8 722 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 PCDHA12Q9UN75 941 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 PCDHA2Q9Y5H9 948 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 MPHOSPH10O00566 681 aaKnown RBP23.34■■□□□ 1.33
LIMS2-214ENST00000476932 SHROOM1Q2M3G4 852 aaPredicted RBP23.34■■□□□ 1.33
LIMS2-214ENST00000476932 TAF3Q5VWG9 929 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 RRAGAQ7L523 313 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 TSG101Q99816 390 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 ZC3H12CQ9C0D7 883 aaKnown RBP23.34■■□□□ 1.33
LIMS2-214ENST00000476932 EHD4Q9H223 541 aa23.34■■□□□ 1.33
LIMS2-214ENST00000476932 TARSL2A2RTX5 802 aaKnown RBP23.33■■□□□ 1.33
LIMS2-214ENST00000476932 EIF3JO75822 258 aaKnown RBP23.33■■□□□ 1.33
LIMS2-214ENST00000476932 ASTE1Q2TB18 679 aaPredicted RBP23.33■■□□□ 1.33
LIMS2-214ENST00000476932 FAM26FQ5R3K3 315 aa23.33■■□□□ 1.33
LIMS2-214ENST00000476932 PDXDC1Q6P996 788 aa23.33■■□□□ 1.33
LIMS2-214ENST00000476932 GPIHBP1Q8IV16 184 aa23.33■■□□□ 1.33
LIMS2-214ENST00000476932 KCNMB3Q9NPA1 279 aa23.33■■□□□ 1.33
LIMS2-214ENST00000476932 PANK4Q9NVE7 773 aa23.33■■□□□ 1.33
LIMS2-214ENST00000476932 AFF2P51816 1311 aa23.33■■□□□ 1.33
LIMS2-214ENST00000476932 KDM3AQ9Y4C1 1321 aa23.33■■□□□ 1.33
LIMS2-214ENST00000476932 USP17L15C9J2P7 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L13C9JLJ4 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L11C9JVI0 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L18D6R9N7 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L22D6RA61 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L17D6RBQ6 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L19D6RCP7 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L20D6RJB6 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 E9PMD0 336 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 HLA-DOAP06340 250 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L24Q0WX57 530 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 QRICH1Q2TAL8 776 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 USP17L6PQ6QN14 398 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 TRIM58Q8NG06 486 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 EXOC4Q96A65 974 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 ZBTB9Q96C00 473 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 SNX12Q9UMY4 172 aa23.33■■□□□ 1.32
LIMS2-214ENST00000476932 UIMC1Q96RL1 719 aa23.32■■□□□ 1.32
LIMS2-214ENST00000476932 COL4A3BPQ9Y5P4 624 aa23.32■■□□□ 1.32
LIMS2-214ENST00000476932 SCN9AQ15858 1988 aa23.32■■□□□ 1.32
LIMS2-214ENST00000476932 BRWD3Q6RI45 1802 aa23.32■■□□□ 1.32
LIMS2-214ENST00000476932 HGSNATQ68CP4 663 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 CREG2Q8IUH2 290 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 TEKT1Q969V4 418 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 PSD3Q9NYI0 1048 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 JRKLQ9Y4A0 524 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 POTEB3A0JP26 581 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 POTECB2RU33 542 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 MOCS3O95396 460 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 FKBP3Q00688 224 aaKnown RBP23.31■■□□□ 1.32
LIMS2-214ENST00000476932 GPS2Q13227 327 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 POTEBQ6S5H4 581 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 TXLNBQ8N3L3 684 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 MBOAT7Q96N66 472 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 EDEM3Q9BZQ6 932 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 NT5C3AQ9H0P0 336 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 JADE2Q9NQC1 790 aa23.31■■□□□ 1.32
LIMS2-214ENST00000476932 USO1O60763 962 aaKnown RBP23.3■■□□□ 1.32
LIMS2-214ENST00000476932 NOL4O94818 638 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 VPS18Q9P253 973 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 SALL4Q9UJQ4 1053 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 KIAA1024Q9UPX6 916 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 NPHP3-ACAD11A0A0J9YXS1 232 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 FAM196BA6NMK8 535 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 PJA2O43164 708 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 PLA2G4BP0C869 781 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 MAPK8IP2Q13387 824 aaPredicted RBP23.3■■□□□ 1.32
LIMS2-214ENST00000476932 ZNF572Q7Z3I7 529 aaPredicted RBP23.3■■□□□ 1.32
LIMS2-214ENST00000476932 CCDC17Q96LX7 622 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 P2RX7Q99572 595 aaKnown RBP23.3■■□□□ 1.32
LIMS2-214ENST00000476932 ANO3Q9BYT9 981 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 TBC1D7Q9P0N9 293 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 PCDHAC2Q9Y5I4 1007 aa23.3■■□□□ 1.32
LIMS2-214ENST00000476932 ZC3H4Q9UPT8 1303 aaKnown RBP23.3■■□□□ 1.32
LIMS2-214ENST00000476932 KIF13BQ9NQT8 1826 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 CYP3A7-CYP3A51PA0A087WV96 503 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 TRAF5O00463 557 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 AKR1B10O60218 316 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 MARCH6O60337 910 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 TACC1O75410 805 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 SSBP05455 408 aaKnown RBP eCLIP23.29■■□□□ 1.32
LIMS2-214ENST00000476932 CYP3A7P24462 503 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 C2orf54Q08AI8 447 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 CAGE1Q8TC20 777 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 COG1Q8WTW3 980 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 CRYGNQ8WXF5 182 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 NAP1L4Q99733 375 aaKnown RBP23.29■■□□□ 1.32
LIMS2-214ENST00000476932 DEF6Q9H4E7 631 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 FAN1Q9Y2M0 1017 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 EEF2P13639 858 aaKnown RBP23.29■■□□□ 1.32
LIMS2-214ENST00000476932 CYP11B2P19099 503 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 CRKP46108 304 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 HNRNPH2P55795 449 aaKnown RBP23.29■■□□□ 1.32
LIMS2-214ENST00000476932 MKL1Q969V6 931 aa23.29■■□□□ 1.32
LIMS2-214ENST00000476932 CEP63Q96MT8 703 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms