RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 CFAP100Q494V2 611 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 METTL24Q5JXM2 366 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 LDLRAD1Q5T700 205 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 SEZ6L2Q6UXD5 910 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 ANKRD13AQ8IZ07 590 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 CERS5Q8N5B7 392 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 VGLL2Q8N8G2 317 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 TDRD7Q8NHU6 1098 aaKnown RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 SHKBP1Q8TBC3 707 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 EPS8L3Q8TE67 593 aaKnown RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 FBF1Q8TES7 1133 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 TEKT1Q969V4 418 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 SUCLG2Q96I99 432 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 BICC1Q9H694 974 aaKnown RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 ACSS3Q9H6R3 686 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 ZCCHC17Q9NP64 241 aaKnown RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 RNF186Q9NXI6 227 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 CACNA2D2Q9NY47 1150 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 TTF2Q9UNY4 1162 aaKnown RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 PCDHGC5Q9Y5F6 944 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 ACTL7BQ9Y614 415 aa5.17□□□□□ -1.58
VPS13D-206ENST00000476045 COL2A1P02458 1487 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-206ENST00000476045 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 CCDC85CA6NKD9 419 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 IGSF3O75054 1194 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 FRAT2O75474 233 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 TAF5LO75529 589 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 PDE8BO95263 885 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 ECEL1O95672 775 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 UBTFL1P0CB47 393 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 ARHGEF6Q15052 776 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 MSMPQ1L6U9 139 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 EPHA10Q5JZY3 1008 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 DCAF15Q66K64 600 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 CDPF1Q6NVV7 123 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 FBXO46Q6PJ61 603 aaPredicted RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 PDZD3Q86UT5 571 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 FAM83AQ86UY5 434 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 TRMT2AQ8IZ69 625 aaKnown RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 ZGPATQ8N5A5 531 aaKnown RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 ANKRD44Q8N8A2 993 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 C3orf58Q8NDZ4 430 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 WDR66Q8TBY9 1149 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 SSH1Q8WYL5 1049 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 LPIN2Q92539 896 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 ERO1AQ96HE7 468 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 WNK4Q96J92 1243 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 ASB16Q96NS5 453 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 WDR18Q9BV38 432 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 MRIQ9BWK5 157 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 VEZTQ9HBM0 779 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 KRT82Q9NSB4 513 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 GNL3LQ9NVN8 582 aaKnown RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 ANGEL1Q9UNK9 670 aaKnown RBP5.16□□□□□ -1.58
VPS13D-206ENST00000476045 RIPOR2Q9Y4F9 1068 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 CSADQ9Y600 493 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 MYH8P13535 1937 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 TRIOBPQ9H2D6 2365 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 SALL1Q9NSC2 1324 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 PHIPQ8WWQ0 1821 aa5.16□□□□□ -1.58
VPS13D-206ENST00000476045 MYH7P12883 1935 aa5.15□□□□□ -1.58
VPS13D-206ENST00000476045 UBE2Q2LH0YL09 131 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 EYA2O00167 538 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 FKTNO75072 461 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 IGHDP01880 384 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 PRNPP04156 253 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 F13BP05160 661 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 GNAI3P08754 354 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 NBPF7P0C2Y1 421 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-206ENST00000476045 DRD2P14416 443 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 CRKP46108 304 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 RBM5P52756 815 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS13D-206ENST00000476045 HHIPL2Q6UWX4 724 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 SND1Q7KZF4 910 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS13D-206ENST00000476045 FBXO33Q7Z6M2 555 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 ZAR1Q86SH2 424 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 NBPF11Q86T75 865 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 C12orf50Q8NA57 414 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-206ENST00000476045 PANK1Q8TE04 598 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 ARHGAP45Q92619 1136 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 FRAT1Q92837 279 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-206ENST00000476045 KAZALD1Q96I82 304 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 FAM84BQ96KN1 310 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-206ENST00000476045 ZDHHC15Q96MV8 337 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 CORO1BQ9BR76 489 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 MXD3Q9BW11 206 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 PCMTD2Q9NV79 361 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF70Q9UC06 446 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-206ENST00000476045 PRKAG2Q9UGJ0 569 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 IVNS1ABPQ9Y6Y0 642 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 NAV1Q8NEY1 1877 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 RFX7Q2KHR2 1363 aa5.15□□□□□ -1.59
VPS13D-206ENST00000476045 DDX60LQ5H9U9 1706 aaKnown RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 FAM95CA0A1B0GW59 222 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 CLRN2A0PK11 232 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 F8W031 263 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 TMPRSS2O15393 492 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 IPO8O15397 1037 aaKnown RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 GADD45BO75293 160 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 MAP4K4O95819 1239 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms