RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PTGIRP43119 386 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 ZNF131P52739 623 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 CKAP4Q07065 602 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 TBL3Q12788 808 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 AKAP4Q5JQC9 854 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 TBC1D10CQ8IV04 446 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 NOSTRINQ8IVI9 506 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 GSPT2Q8IYD1 628 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 LARGE2Q8N3Y3 721 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 DENND1AQ8TEH3 1009 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 METTL22Q9BUU2 404 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 RBM12Q9NTZ6 932 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 NKX1-2Q9UD57 310 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 PA2G4Q9UQ80 394 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 DUSP10Q9Y6W6 482 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 COL11A1P12107 1806 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 LCTP09848 1927 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PAPPA2Q9BXP8 1791 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 F8VZ95 297 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 SART1O43290 800 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 ANP32DO95626 131 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 NR1D1P20393 614 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 FGFR2P21802 821 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 JAM2P57087 298 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 SETQ01105 290 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 GUCY1A3Q02108 690 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 RASA2Q15283 850 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 TRADDQ15628 312 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 CLPPQ16740 277 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 FOXD4L6Q3SYB3 417 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 ZNF569Q5MCW4 686 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PPP1R15BQ5SWA1 713 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 ZNF658Q5TYW1 1059 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 DCLRE1AQ6PJP8 1040 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 APOA5Q6Q788 366 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 FOXD4L3Q6VB84 417 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 GIGYF2Q6Y7W6 1299 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 LRRC55Q6ZSA7 311 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 UNC13DQ70J99 1090 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 SRBD1Q8N5C6 995 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 DAGLBQ8NCG7 672 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 MTMR8Q96EF0 704 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 TCEANC2Q96MN5 208 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 KIF9Q9HAQ2 790 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PIDD1Q9HB75 910 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 METTL5Q9NRN9 209 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 GRHL1Q9NZI5 618 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 KANSL3Q9P2N6 904 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 LGALS13Q9UHV8 139 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 SYNRGQ9UMZ2 1314 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 A0A0A6YYK5 440 aaPredicted RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 PI4KAP2A4QPH2 592 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 EPHB6O15197 1021 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 BUD23O43709 281 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 NQO1P15559 274 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 TMOD1P28289 359 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PFKPQ01813 784 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PPP2R5AQ15172 486 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 DUPD1Q68J44 220 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 KRT40Q6A162 431 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.55□□□□□ -1.68
USP16-205ENST00000474835 PI4KAP1Q8N8J0 262 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 KRI1Q8N9T8 703 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 TRIM58Q8NG06 486 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 NSMCE1Q8WV22 266 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 IP6K1Q92551 441 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 JAKMIP2Q96AA8 810 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 EDC3Q96F86 508 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 THOC1Q96FV9 657 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 HES6Q96HZ4 224 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 MIS18AQ9NYP9 233 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 ZFATQ9P243 1243 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PUF60Q9UHX1 559 aaKnown RBP4.55□□□□□ -1.68
USP16-205ENST00000474835 DENND2AQ9ULE3 1009 aa4.55□□□□□ -1.68
USP16-205ENST00000474835 PCNTO95613 3336 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 A0A1B0GVG6 124 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 FRMD3A2A2Y4 597 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 UBE2Q2LH0YL09 131 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 MPHOSPH10O00566 681 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 WDR46O15213 610 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 SNX3O60493 162 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SRGAP2O75044 1071 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 IPO7O95373 1038 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 KRT14P02533 472 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 SP100P23497 879 aaPredicted RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 CDC25AP30304 524 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 FLT3P36888 993 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 CARSP49589 748 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 NPEPPSP55786 919 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 ZBED6P86452 979 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 PPATQ06203 517 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 KCNMA1Q12791 1236 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 KARSQ15046 597 aaKnown RBP4.54□□□□□ -1.68
USP16-205ENST00000474835 NAB2Q15742 525 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 PTPN21Q16825 1174 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 DCAF12L1Q5VU92 463 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 CENPPQ6IPU0 288 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 KANK3Q6NY19 840 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 VSTM1Q6UX27 236 aa4.54□□□□□ -1.68
USP16-205ENST00000474835 CCDC129Q6ZRS4 1044 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms