RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ERCC3P19447 782 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 CIITAP33076 1130 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 RPS6P62753 249 aaKnown RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 PABPC4Q13310 644 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLK1-210ENST00000473565 CTTNQ14247 550 aaKnown RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 PLS1Q14651 629 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 EAPPQ56P03 285 aaPredicted RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 LRRC8AQ8IWT6 810 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 ADSSL1Q8N142 457 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 GIMAP8Q8ND71 665 aaPredicted RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 KIAA1524Q8TCG1 905 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 TAAR1Q96RJ0 339 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 CUEDC2Q9H467 287 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 TAB2Q9NYJ8 693 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 ITGB5P18084 799 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 GPR162Q16538 588 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 SUPT20HL1Q3ZLR7 823 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 CEP55Q53EZ4 464 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 TREML2Q5T2D2 321 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 CDKAL1Q5VV42 579 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 SNRNP48Q6IEG0 339 aaKnown RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 TRMT1LQ7Z2T5 733 aaKnown RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 SLFN12Q8IYM2 578 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 SYTL5Q8TDW5 730 aaPredicted RBP6.97□□□□□ -1.29
CLK1-210ENST00000473565 TRERF1Q96PN7 1200 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 WDR11Q9BZH6 1224 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 VPS16Q9H269 839 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 ZHX3Q9H4I2 956 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 ELP3Q9H9T3 547 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 STK17AQ9UEE5 414 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 OTOFQ9HC10 1997 aa6.97□□□□□ -1.29
CLK1-210ENST00000473565 ZBED4O75132 1171 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 CYP3A4P08684 503 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 PLA2G4BP0C869 781 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 POTEJP0CG39 1038 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 MYCLP12524 364 aaPredicted RBP6.96□□□□□ -1.29
CLK1-210ENST00000473565 HSD17B4P51659 736 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 USP14P54578 494 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 CCZ1BP86790 482 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 CCZ1P86791 482 aaPredicted RBP6.96□□□□□ -1.29
CLK1-210ENST00000473565 KCNB1Q14721 858 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 NOLC1Q14978 699 aaKnown RBP eCLIP6.96□□□□□ -1.29
CLK1-210ENST00000473565 LRCH2Q5VUJ6 765 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 MOXD1Q6UVY6 613 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 GPBP1Q86WP2 473 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 VSTM4Q8IW00 320 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 PIGOQ8TEQ8 1089 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 NAP1L4Q99733 375 aaKnown RBP6.96□□□□□ -1.29
CLK1-210ENST00000473565 AS3MTQ9HBK9 375 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 RNF146Q9NTX7 359 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 RWDD2AQ9UIY3 292 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 AFG3L2Q9Y4W6 797 aa6.96□□□□□ -1.29
CLK1-210ENST00000473565 USP27XA6NNY8 438 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 SKILP12757 684 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.3
CLK1-210ENST00000473565 TMEM132BQ14DG7 1078 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 KRT31Q15323 416 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 DNAJC19Q96DA6 116 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 OTUD5Q96G74 571 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 TRIM47Q96LD4 638 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 MAGEF1Q9HAY2 307 aa6.96□□□□□ -1.3
CLK1-210ENST00000473565 CBFA2T2O43439 604 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 SORBS3O60504 671 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 GAS7O60861 476 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 ADKP55263 362 aaKnown RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 MAP3K9P80192 1104 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 MRPS9P82933 396 aaKnown RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 AMPD3Q01432 767 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 TRAF1Q13077 416 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 BAATQ14032 418 aaPredicted RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 ARSHQ5FYA8 562 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 ANKRD40Q6AI12 368 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 TPH2Q8IWU9 490 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 CPLX3Q8WVH0 158 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 DYDC2Q96IM9 177 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 DUSP9Q99956 384 aaKnown RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 EIF2AK1Q9BQI3 630 aaKnown RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 ZNF577Q9BSK1 485 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 SRRTQ9BXP5 876 aaKnown RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 SEMA6BQ9H3T3 888 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 R3HDMLQ9H3Y0 253 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 TRMT1Q9NXH9 659 aaKnown RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 TMOD4Q9NZQ9 345 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 WRAP73Q9P2S5 460 aaPredicted RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 WDR90Q96KV7 1748 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 RSPH10B2B2RC85 870 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 KCNJ18B7U540 433 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 PSMA7O14818 248 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 IRF6O14896 467 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 PSMD10O75832 226 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 KRT18P05783 430 aaKnown RBP6.95□□□□□ -1.3
CLK1-210ENST00000473565 RSPH10BP0C881 870 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 CYP11B2P19099 503 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 EPHX2P34913 555 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 COASYQ13057 564 aa6.95□□□□□ -1.3
CLK1-210ENST00000473565 KCNJ12Q14500 433 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms