RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 PDXDC2PQ6P474 469 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 SHCBP1Q8NEM2 672 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 SNX29Q8TEQ0 813 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 SLC5A5Q92911 643 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 MS4A4AQ96JQ5 239 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 GSDMAQ96QA5 445 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 IWS1Q96ST2 819 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 MPHOSPH6Q99547 160 aaKnown RBP14.42□□□□□ -0.1
VPS13D-205ENST00000473099 RIT2Q99578 217 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 PDCD2LQ9BRP1 358 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 GTPBP4Q9BZE4 634 aaKnown RBP14.42□□□□□ -0.1
VPS13D-205ENST00000473099 LRRC27Q9C0I9 530 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 RBSNQ9H1K0 784 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 MROH8Q9H579 483 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 ZCCHC17Q9NP64 241 aaKnown RBP14.42□□□□□ -0.1
VPS13D-205ENST00000473099 A1CFQ9NQ94 594 aaKnown RBP14.42□□□□□ -0.1
VPS13D-205ENST00000473099 UBIAD1Q9Y5Z9 338 aa14.42□□□□□ -0.1
VPS13D-205ENST00000473099 POTEMA6NI47 508 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 PP2D1A8MPX8 630 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 MUTP22033 750 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 DEKP35659 375 aaKnown RBP14.41□□□□□ -0.1
VPS13D-205ENST00000473099 CCNA1P78396 465 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 PNOCQ13519 176 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 ANO6Q4KMQ2 910 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 CT47A1Q5JQC4 288 aaPredicted RBP14.41□□□□□ -0.1
VPS13D-205ENST00000473099 CST9Q5W186 159 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 ANKRD35Q8N283 1001 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 SPATA20Q8TB22 786 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 PAGE5Q96GU1 130 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 CDHR1Q96JP9 859 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 TAAR1Q96RJ0 339 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 PAGR1Q9BTK6 254 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 JADE2Q9NQC1 790 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 RMND1Q9NWS8 449 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 ADD3Q9UEY8 706 aaKnown RBP14.41□□□□□ -0.1
VPS13D-205ENST00000473099 DACH1Q9UI36 760 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 ZNF236Q9UL36 1845 aa14.41□□□□□ -0.1
VPS13D-205ENST00000473099 LOC102724159A0A0B4J2E5 919 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 TESPA1A2RU30 521 aaPredicted RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 MANSC4A6NHS7 340 aaPredicted RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 CNMDO75829 334 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 PLCG1P19174 1290 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 EIF2AK2P19525 551 aaKnown RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 CDC25AP30304 524 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 SARSP49591 514 aaKnown RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 ZNF165P49910 485 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 UBXN2AP68543 259 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 PPP2R5CQ13362 524 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 PWP2Q15269 919 aaKnown RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 TMEM119Q4V9L6 283 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 NLRX1Q86UT6 975 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 NCAPG2Q86XI2 1143 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 SMCR8Q8TEV9 937 aaPredicted RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 CCDC47Q96A33 483 aaKnown RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 GPRASP2Q96D09 838 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 BPIFA3Q9BQP9 254 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 ZNF577Q9BSK1 485 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 MMTAG2Q9BU76 263 aaKnown RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 TEKT3Q9BXF9 490 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 MOV10L1Q9BXT6 1211 aaKnown RBP14.4□□□□□ -0.1
VPS13D-205ENST00000473099 TBC1D22BQ9NU19 505 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 KBTBD4Q9NVX7 518 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 TCEAL9Q9UHQ7 104 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 PCDHA5Q9Y5H7 936 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 MGAMO43451 1857 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 PASKQ96RG2 1323 aa14.4□□□□□ -0.1
VPS13D-205ENST00000473099 BTBD19C9JJ37 291 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 PDHXO00330 501 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 IPO5O00410 1097 aaKnown RBP14.39□□□□□ -0.11
VPS13D-205ENST00000473099 GAS7O60861 476 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 PSMD10O75832 226 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 NR3C2P08235 984 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 RPA1P27694 616 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 CCT6AP40227 531 aaKnown RBP14.39□□□□□ -0.11
VPS13D-205ENST00000473099 AFMP43652 599 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 ERVK-9P63128 1117 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 ERVK-24P63145 666 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 SPIRE1Q08AE8 756 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 DPYDQ12882 1025 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 GRB10Q13322 594 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 GNPTABQ3T906 1256 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 NAALADL2Q58DX5 795 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 SV2BQ7L1I2 683 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 VSIG10LQ86VR7 867 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 NEK9Q8TD19 979 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 BRI3BPQ8WY22 251 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 LARP4BQ92615 738 aaKnown RBP14.39□□□□□ -0.11
VPS13D-205ENST00000473099 POLR3CQ9BUI4 534 aaPredicted RBP14.39□□□□□ -0.11
VPS13D-205ENST00000473099 RBPJLQ9UBG7 517 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 VAV3Q9UKW4 847 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 DOCK3Q8IZD9 2030 aa14.39□□□□□ -0.11
VPS13D-205ENST00000473099 ARID2Q68CP9 1835 aa14.38□□□□□ -0.11
VPS13D-205ENST00000473099 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
VPS13D-205ENST00000473099 MYCLP12524 364 aaPredicted RBP14.38□□□□□ -0.11
VPS13D-205ENST00000473099 ITGB5P18084 799 aa14.38□□□□□ -0.11
VPS13D-205ENST00000473099 ERCC3P19447 782 aa14.38□□□□□ -0.11
VPS13D-205ENST00000473099 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
VPS13D-205ENST00000473099 INHBEP58166 350 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms