RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 TRAF7Q6Q0C0 670 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 RPAP2Q8IXW5 612 aaPredicted RBP6.98□□□□□ -1.29
SIK3-208ENST00000472648 DHX37Q8IY37 1157 aaKnown RBP6.98□□□□□ -1.29
SIK3-208ENST00000472648 CHURC1Q8WUH1 139 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 AFG1LQ8WV93 481 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 CLP1Q92989 425 aaKnown RBP6.98□□□□□ -1.29
SIK3-208ENST00000472648 NEK1Q96PY6 1258 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 ALG1Q9BT22 464 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 TLE6Q9H808 572 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 ARMT1Q9H993 441 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 SH2B1Q9NRF2 756 aaPredicted RBP6.98□□□□□ -1.29
SIK3-208ENST00000472648 CLIP2Q9UDT6 1046 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 DBNLQ9UJU6 430 aaKnown RBP6.98□□□□□ -1.29
SIK3-208ENST00000472648 CDV3Q9UKY7 258 aaKnown RBP6.98□□□□□ -1.29
SIK3-208ENST00000472648 R4GN57 208 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 FASNP49327 2511 aaKnown RBP6.98□□□□□ -1.29
SIK3-208ENST00000472648 ZNF532Q9HCE3 1301 aa6.98□□□□□ -1.29
SIK3-208ENST00000472648 FRYQ5TBA9 3013 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 PNMA6EA0A0J9YXQ4 647 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.97□□□□□ -1.29
SIK3-208ENST00000472648 PTPDC1A2A3K4 754 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 TMEM232C9JQI7 657 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 RBAK-RBAKDNI3L0D1 243 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 ADRB1P08588 477 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 AOC1P19801 751 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 PSEN2P49810 448 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 MFSD10Q14728 455 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 TRIM71Q2Q1W2 868 aaKnown RBP6.97□□□□□ -1.29
SIK3-208ENST00000472648 ALDH1L2Q3SY69 923 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 NAALADL2Q58DX5 795 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 SLFN13Q68D06 897 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 CWF19L1Q69YN2 538 aaKnown RBP6.97□□□□□ -1.29
SIK3-208ENST00000472648 FAM160B2Q86V87 743 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 DTWD2Q8NBA8 298 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 APBB2Q92870 758 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 P2RX5Q93086 422 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 WNT8BQ93098 351 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 RTP3Q9BQQ7 232 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.97□□□□□ -1.29
SIK3-208ENST00000472648 CCDC8Q9H0W5 538 aaPredicted RBP6.97□□□□□ -1.29
SIK3-208ENST00000472648 SMOC2Q9H3U7 446 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 MKNK2Q9HBH9 465 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 TLR7Q9NYK1 1049 aaKnown RBP6.97□□□□□ -1.29
SIK3-208ENST00000472648 CCPG1Q9ULG6 757 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 PLAGL2Q9UPG8 496 aa6.97□□□□□ -1.29
SIK3-208ENST00000472648 CACNA1IQ9P0X4 2223 aa6.96□□□□□ -1.29
SIK3-208ENST00000472648 SPEGQ15772 3267 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 B4DLN1 442 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 PRKAB2O43741 272 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 MBD4O95243 580 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 GNAI2P04899 355 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 ITGB1P05556 798 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 LINC00271P0C7V0 271 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 HOXB3P14651 431 aaPredicted RBP6.96□□□□□ -1.3
SIK3-208ENST00000472648 DNAJB1P25685 340 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 MRPL12P52815 198 aaKnown RBP6.96□□□□□ -1.3
SIK3-208ENST00000472648 ATXN1P54253 815 aaKnown RBP6.96□□□□□ -1.3
SIK3-208ENST00000472648 CAMK1Q14012 370 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 BAATQ14032 418 aaPredicted RBP6.96□□□□□ -1.3
SIK3-208ENST00000472648 DGKDQ16760 1214 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 KIAA0753Q2KHM9 967 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 CHST3Q7LGC8 479 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 DCLK2Q8N568 766 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 GMCL1P1Q8NEA9 526 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 POF1BQ8WVV4 589 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 KAT2BQ92831 832 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 API5Q9BZZ5 524 aaKnown RBP6.96□□□□□ -1.3
SIK3-208ENST00000472648 NCDNQ9UBB6 729 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 SYNPO2Q9UMS6 1093 aa6.96□□□□□ -1.3
SIK3-208ENST00000472648 MYH15Q9Y2K3 1946 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 GCN1Q92616 2671 aaKnown RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 NBEAQ8NFP9 2946 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 TCRBV5S4A2TA0A5A2 114 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 PER2O15055 1255 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 PI15O43692 258 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 ARIH2O95376 493 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 TTLL1O95922 423 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 F2P00734 622 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 GH1P01241 217 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 CTSHP09668 335 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 ZNF286BP0CG31 522 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 RASA1P20936 1047 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 RFX1P22670 979 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 CALML3P27482 149 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 TECP42680 631 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 SNAP25P60880 206 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 ZNF200P98182 395 aaPredicted RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 CCDC184Q52MB2 194 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 SLC30A10Q6XR72 485 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 SERINC5Q86VE9 423 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 STK11IPQ8N1F8 1099 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 KLHL23Q8NBE8 558 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 SPPL3Q8TCT6 385 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 MICAL1Q8TDZ2 1067 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 STAG1Q8WVM7 1258 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 CEP95Q96GE4 821 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 CDCA3Q99618 268 aaPredicted RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 RTKNQ9BST9 563 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms