RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CYP7B1O75881 506 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 CYP1A1P04798 512 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 ITGB3P05106 788 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 MAGEA10P43363 369 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 GFRA1P56159 465 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 ITGA1P56199 1179 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 Q8N1Y9 231 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 TXNDC5Q8NBS9 432 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 TMEM145Q8NBT3 493 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 KCTD13Q8WZ19 329 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 LCORQ96JN0 433 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 ZNF652Q9Y2D9 606 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 PCDHB4Q9Y5E5 795 aa5.62□□□□□ -1.51
PRPF40A-207ENST00000471701 GJB6O95452 261 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 PLATP00750 562 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 LCP1P13796 627 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 TESK1Q15569 626 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 CR1LQ2VPA4 569 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 NLRP10Q86W26 655 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 CHST13Q8NET6 341 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 MICAL1Q8TDZ2 1067 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 LOXL4Q96JB6 756 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 CLIC6Q96NY7 704 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 EPB41L1Q9H4G0 881 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 L2HGDHQ9H9P8 463 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 SMPD4Q9NXE4 827 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 INVSQ9Y283 1065 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 MYRFQ9Y2G1 1151 aa5.61□□□□□ -1.51
PRPF40A-207ENST00000471701 KRIT1O00522 736 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 TADA3O75528 432 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 TCF3P15923 654 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 IL13P35225 146 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 PUM1Q14671 1186 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 SURF1Q15526 300 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 TRIM48Q8IWZ4 208 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 ARRDC4Q8NCT1 418 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 SMOC1Q9H4F8 434 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 ZNF408Q9H9D4 720 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 ST7Q9NRC1 585 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 DTLQ9NZJ0 730 aa5.6□□□□□ -1.51
PRPF40A-207ENST00000471701 TCRBV5S2A0A599 114 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 C9orf118A6NHY6 69 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 DNAJA1P31689 397 aaKnown RBP5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 PPP2R2AP63151 447 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 HSP90AA2PQ14568 343 aaPredicted RBP5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 TBC1D10BQ4KMP7 808 aaPredicted RBP5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 EMC4Q5J8M3 183 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 PRR31Q5SQ13 230 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 MRM1Q6IN84 353 aaKnown RBP5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 TEPPQ6URK8 271 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 PHOSPHO1Q8TCT1 267 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 SAMD11Q96NU1 681 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 RBM15Q96T37 977 aaKnown RBP eCLIP5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 TMEM168Q9H0V1 697 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 FBXL7Q9UJT9 491 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 CROTQ9UKG9 612 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 NPFFR2Q9Y5X5 522 aa5.59□□□□□ -1.51
PRPF40A-207ENST00000471701 A0A1W2PQU0 124 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 IQCA1LA6NCM1 817 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 MAP4K2Q12851 820 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 ADAM9Q13443 819 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 SLC35F1Q5T1Q4 408 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 DENND5AQ6IQ26 1287 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 USP53Q70EK8 1073 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 PLEKHH3Q7Z736 793 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 WRNIP1Q96S55 665 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 TMEM209Q96SK2 561 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 IER2Q9BTL4 223 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 GPR27Q9NS67 375 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 MYOTQ9UBF9 498 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 CCDC9Q9Y3X0 531 aaKnown RBP5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 NUB1Q9Y5A7 615 aa5.58□□□□□ -1.52
PRPF40A-207ENST00000471701 LRG1P02750 347 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 GRIA2P42262 883 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 ADAM17P78536 824 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 SLC10A6Q3KNW5 377 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 CPZQ66K79 652 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 ANKS3Q6ZW76 656 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 SGSM3Q96HU1 749 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 ZSWIM3Q96MP5 696 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 JAM3Q9BX67 310 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 SLC6A20Q9NP91 592 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 FTSJ1Q9UET6 329 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 ZDHHC9Q9Y397 364 aa5.57□□□□□ -1.52
PRPF40A-207ENST00000471701 FGRP09769 529 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 ZNF28P17035 718 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 CYP4F22Q6NT55 531 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 RSPO2Q6UXX9 243 aaPredicted RBP5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 MCF2L2Q86YR7 1114 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 TTC9BQ8N6N2 239 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 HNRNPLLQ8WVV9 542 aaKnown RBP5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 C1orf159Q96HA4 380 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 TMPRSS5Q9H3S3 457 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 JADE2Q9NQC1 790 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 ASH2LQ9UBL3 628 aa5.56□□□□□ -1.52
PRPF40A-207ENST00000471701 NPEPPSL1A6NEC2 478 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms