RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CCDC96Q2M329 555 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 SYDE2Q5VT97 1194 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 DCAF4Q8WV16 495 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 FSD1Q9BTV5 496 aa14.17□□□□□ -0.14
LSM2-209ENST00000470083 HAS3O00219 553 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 GRM6O15303 877 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 UPP2O95045 317 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 APPP05067 770 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 SLC3A2P08195 630 aaKnown RBP14.16□□□□□ -0.14
LSM2-209ENST00000470083 AVPR2P30518 371 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
LSM2-209ENST00000470083 SLC16A2P36021 539 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 NUBP1P53384 320 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 LY6KQ17RY6 165 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 KIAA0753Q2KHM9 967 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 TTBK2Q6IQ55 1244 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 CHST3Q7LGC8 479 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 ASCL5Q7RTU5 278 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 SEPT8Q92599 483 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
LSM2-209ENST00000470083 ASIC4Q96FT7 647 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 MSLNLQ96KJ4 702 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 ALG1Q9BT22 464 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 IFIH1Q9BYX4 1025 aaKnown RBP14.16□□□□□ -0.14
LSM2-209ENST00000470083 GVINP1Q7Z2Y8 2422 aa14.16□□□□□ -0.14
LSM2-209ENST00000470083 MICAL3Q7RTP6 2002 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.15□□□□□ -0.14
LSM2-209ENST00000470083 LINC01565O15544 149 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 BMPR1AP36894 532 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 THPOP40225 353 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 ZNF200P98182 395 aaPredicted RBP14.15□□□□□ -0.14
LSM2-209ENST00000470083 ADAM15Q13444 863 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 SERINC5Q86VE9 423 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 IFNL3Q8IZI9 196 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 FIBCD1Q8N539 461 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 SMRP1Q8NCR6 262 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 NACAP1Q9BZK3 213 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 IL17RBQ9NRM6 502 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 MTMR7Q9Y216 660 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 RWDD3Q9Y3V2 267 aa14.15□□□□□ -0.14
LSM2-209ENST00000470083 PRR23AA6NEV1 266 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 TSPY2A6NKD2 308 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 PATL2C9JE40 543 aaKnown RBP14.14□□□□□ -0.15
LSM2-209ENST00000470083 H0Y858 1186 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 NMT2O60551 498 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 HMMRO75330 724 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 ZNF286BP0CG31 522 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 NOVP48745 357 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 NDUFV1P49821 464 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 PPARAQ07869 468 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 SEPT14Q6ZU15 432 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 DHX37Q8IY37 1157 aaKnown RBP14.14□□□□□ -0.15
LSM2-209ENST00000470083 KBTBD3Q8NAB2 608 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 PPTC7Q8NI37 304 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 IL17RAQ96F46 866 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 IGFLR1Q9H665 355 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 TLR9Q9NR96 1032 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 WDR19Q8NEZ3 1342 aa14.14□□□□□ -0.15
LSM2-209ENST00000470083 KMT2EQ8IZD2 1858 aa14.13□□□□□ -0.15
LSM2-209ENST00000470083 RNF113AO15541 343 aaKnown RBP14.13□□□□□ -0.15
LSM2-209ENST00000470083 MMP1P03956 469 aa14.13□□□□□ -0.15
LSM2-209ENST00000470083 ZFYP08048 801 aaPredicted RBP14.13□□□□□ -0.15
LSM2-209ENST00000470083 HOXD8P13378 290 aaPredicted RBP14.13□□□□□ -0.15
LSM2-209ENST00000470083 COASYQ13057 564 aa14.13□□□□□ -0.15
LSM2-209ENST00000470083 HIC1Q14526 733 aa14.13□□□□□ -0.15
LSM2-209ENST00000470083 RGS22Q8NE09 1264 aa14.13□□□□□ -0.15
LSM2-209ENST00000470083 CLP1Q92989 425 aaKnown RBP14.13□□□□□ -0.15
LSM2-209ENST00000470083 PPP2R3CQ969Q6 453 aa14.13□□□□□ -0.15
LSM2-209ENST00000470083 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
LSM2-209ENST00000470083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
LSM2-209ENST00000470083 M0R2C6 588 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
LSM2-209ENST00000470083 CAND2O75155 1236 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 NBL1P41271 181 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 ID4P47928 161 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 RRP1P56182 461 aaKnown RBP14.12□□□□□ -0.15
LSM2-209ENST00000470083 LAMC2Q13753 1193 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 PHF7Q9BWX1 381 aaPredicted RBP14.12□□□□□ -0.15
LSM2-209ENST00000470083 NAPBQ9H115 298 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 INCENPQ9NQS7 918 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 CLEC1BQ9P126 229 aa14.12□□□□□ -0.15
LSM2-209ENST00000470083 DDX41Q9UJV9 622 aaKnown RBP14.12□□□□□ -0.15
LSM2-209ENST00000470083 MYH7P12883 1935 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 ICAM3P32942 547 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 CACNA1BQ00975 2339 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 CAMK1Q14012 370 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 STXBP2Q15833 593 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 EFHBQ8N7U6 833 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 NSUN6Q8TEA1 469 aaKnown RBP14.11□□□□□ -0.15
LSM2-209ENST00000470083 APBB2Q92870 758 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 PLVAPQ9BX97 442 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 MAF1Q9H063 256 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 RC3H2Q9HBD1 1191 aaKnown RBP14.11□□□□□ -0.15
LSM2-209ENST00000470083 GPCPD1Q9NPB8 672 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 USP15Q9Y4E8 981 aaPredicted RBP14.11□□□□□ -0.15
LSM2-209ENST00000470083 FRMPD2Q68DX3 1309 aaPredicted RBP14.11□□□□□ -0.15
LSM2-209ENST00000470083 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
LSM2-209ENST00000470083 EPG5Q9HCE0 2579 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms