RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 NLRC4Q9NPP4 1024 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 SHTN1A0MZ66 631 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 YDJCA8MPS7 323 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 MMP14P50281 582 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 PSMC6P62333 389 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 CCDC93Q567U6 631 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 MUM1L1Q5H9M0 696 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 C10orf67Q8IYJ2 551 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 TXLNBQ8N3L3 684 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 MTMR9Q96QG7 549 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 PANX2Q96RD6 677 aa10.49□□□□□ -0.73
TOP3A-203ENST00000469739 BMP2KQ9NSY1 1161 aaPredicted RBP10.49□□□□□ -0.73
TOP3A-203ENST00000469739 CENPFP49454 3210 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 TRAF5O00463 557 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 ZNF76P36508 570 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 SPAG1Q07617 926 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 TBC1D10BQ4KMP7 808 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-203ENST00000469739 SH2D3AQ9BRG2 576 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 PYM1Q9BRP8 204 aaKnown RBP10.48□□□□□ -0.73
TOP3A-203ENST00000469739 FHOD1Q9Y613 1164 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 ZBTB39O15060 712 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 MYO1BO43795 1136 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 PTPROQ16827 1216 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 HERC4Q5GLZ8 1057 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-203ENST00000469739 HHIPL2Q6UWX4 724 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 DNAAF5Q86Y56 855 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 ANO3Q9BYT9 981 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 GLIS2Q9BZE0 524 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-203ENST00000469739 RIC8AQ9NPQ8 531 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 FBXO28Q9NVF7 368 aa10.48□□□□□ -0.73
TOP3A-203ENST00000469739 EPN1Q9Y6I3 576 aaPredicted RBP10.48□□□□□ -0.73
TOP3A-203ENST00000469739 LOC102724159A0A0B4J2E5 919 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 IGKV6D-41A0A0C4DH26 115 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 LGALS16A8MUM7 142 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 DDX39AO00148 427 aaKnown RBP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 POLR3GO15318 223 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 CCNE1P24864 410 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 AMPD3Q01432 767 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 PWP2Q15269 919 aaKnown RBP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 KIAA1328Q86T90 577 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 LARGE2Q8N3Y3 721 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 NOC3LQ8WTT2 800 aaKnown RBP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 ZDHHC15Q96MV8 337 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 GDAP1L1Q96MZ0 367 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 TMEM39BQ9GZU3 492 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 PLEKHA4Q9H4M7 779 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 SWAP70Q9UH65 585 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 PHLPP2Q6ZVD8 1323 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 RGPD3A6NKT7 1758 aaPredicted RBP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 RGPD4Q7Z3J3 1758 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 MYO1CO00159 1063 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 LAD1O00515 517 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 PRPHP41219 470 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 OR8K1Q8NGG5 319 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 PIGOQ8TEQ8 1089 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 AK8Q96MA6 479 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 RGL1Q9NZL6 768 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 FZD1Q9UP38 647 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 BCS1LQ9Y276 419 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 SNHG28P0DPA3 235 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 PLS1Q14651 629 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 CCDC122Q5T0U0 273 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 FAM83BQ5T0W9 1011 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 FKBP15Q5T1M5 1219 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 GPATCH4Q5T3I0 446 aaKnown RBP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 STRIP1Q5VSL9 837 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 CYP26C1Q6V0L0 522 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 GPBP1Q86WP2 473 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 RAD54LQ92698 747 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 RAB34Q9BZG1 259 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 HOMER2Q9NSB8 354 aa10.47□□□□□ -0.73
TOP3A-203ENST00000469739 REXO2Q9Y3B8 237 aaKnown RBP10.47□□□□□ -0.73
TOP3A-203ENST00000469739 RCCD1A6NED2 376 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 TRIM66O15016 1216 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 PLSCR1O15162 318 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 MED24O75448 989 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 TADA3O75528 432 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 ZMYND10O75800 440 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 NDUFA10O95299 355 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 PNMA6AP0CW24 399 aaPredicted RBP10.46□□□□□ -0.73
TOP3A-203ENST00000469739 H2AFXP16104 143 aaPredicted RBP10.46□□□□□ -0.73
TOP3A-203ENST00000469739 CNNM4Q6P4Q7 775 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 WDR59Q6PJI9 974 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 ZNF662Q6ZS27 426 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 PLCD4Q9BRC7 762 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 LACRTQ9GZZ8 138 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 SUGCTQ9HAC7 445 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 PANK4Q9NVE7 773 aa10.46□□□□□ -0.73
TOP3A-203ENST00000469739 SCN9AQ15858 1988 aa10.46□□□□□ -0.74
TOP3A-203ENST00000469739 LRRC10BA6NIK2 292 aa10.46□□□□□ -0.74
TOP3A-203ENST00000469739 FAM86B1E9PN63 330 aa10.46□□□□□ -0.74
TOP3A-203ENST00000469739 FAM86B2P0C5J1 330 aa10.46□□□□□ -0.74
TOP3A-203ENST00000469739 PLA2G4AP47712 749 aa10.46□□□□□ -0.74
TOP3A-203ENST00000469739 KCNB1Q14721 858 aa10.46□□□□□ -0.74
TOP3A-203ENST00000469739 CCDC40Q4G0X9 1142 aa10.46□□□□□ -0.74
TOP3A-203ENST00000469739 ICE2Q659A1 982 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms