RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 HPS3Q969F9 1004 aa19.91■□□□□ 0.78
SNAPC3-205ENST00000467062 JAKMIP2Q96AA8 810 aa19.91■□□□□ 0.78
SNAPC3-205ENST00000467062 UIMC1Q96RL1 719 aa19.91■□□□□ 0.78
SNAPC3-205ENST00000467062 ABHD10Q9NUJ1 306 aa19.91■□□□□ 0.78
SNAPC3-205ENST00000467062 EME2A4GXA9 379 aaPredicted RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 SMCO2A6NFE2 343 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 SKAP2O75563 359 aaPredicted RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 SSBP05455 408 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 APBA1Q02410 837 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 TCP11X2Q5H9J9 407 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 ARL6IP4Q66PJ3 421 aaKnown RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 NUP88Q99567 741 aaPredicted RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 TMEM260Q9NX78 707 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 GGA1Q9UJY5 639 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 FLT1P17948 1338 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 SRCAPQ6ZRS2 3230 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 SRGAP2O75044 1071 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 TECP42680 631 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 COPB1P53618 953 aaKnown RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 TXNRD1Q16881 649 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 CDCA2Q69YH5 1023 aaPredicted RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 IRF2BP1Q8IU81 584 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 KIRREL3Q8IZU9 778 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 RRP36Q96EU6 259 aaKnown RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 RNPC3Q96LT9 517 aaKnown RBP19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 RWDD2AQ9UIY3 292 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 UTRNP46939 3433 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 LDHCP07864 332 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 GYS1P13807 737 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 GTF2IP78347 998 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 UBXN1Q04323 297 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 ANKS1AQ92625 1134 aa19.9■□□□□ 0.78
SNAPC3-205ENST00000467062 NKRFO15226 690 aaKnown RBP eCLIP19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 PPP1R12BO60237 982 aaPredicted RBP19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 RHBDL3P58872 404 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 LRRC47Q8N1G4 583 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 LMBR1Q8WVP7 490 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 SH3GLB2Q9NR46 395 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 EPN1Q9Y6I3 576 aaPredicted RBP19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 IPO7O95373 1038 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 PARP1P09874 1014 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 GNAQP50148 359 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 HDLBPQ00341 1268 aaKnown RBP19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 GUCY1A3Q02108 690 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 TRIM14Q14142 442 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 MMGT1Q8N4V1 131 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 COA7Q96BR5 231 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 TFR2Q9UP52 801 aa19.89■□□□□ 0.77
SNAPC3-205ENST00000467062 C3orf20Q8ND61 904 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 TCP11Q8WWU5 503 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 CHP1Q99653 195 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 NUCKS1Q9H1E3 243 aaKnown RBP19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 HAUS2Q9NVX0 235 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 KIAA1551Q9HCM1 1747 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 GPR75-ASB3A0A0A6YYF3 556 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 RGL2O15211 777 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 PECAM1P16284 738 aaPredicted RBP19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 PLCG1P19174 1290 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 TBC1D16Q8TBP0 767 aa19.88■□□□□ 0.77
SNAPC3-205ENST00000467062 NDUFA10O95299 355 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 MDH1P40925 334 aaKnown RBP19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 C16orf86Q6ZW13 317 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 SH2D3CQ8N5H7 860 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 TBCKQ8TEA7 893 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 CAVIN3Q969G5 261 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 LIMA1Q9UHB6 759 aaKnown RBP19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 KLRC4O43908 158 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 KRT9P35527 623 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 XRCC4Q13426 336 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 SLMAPQ14BN4 828 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 ADSSL1Q8N142 457 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 GJA10Q969M2 543 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 TCP11L1Q9NUJ3 509 aa19.87■□□□□ 0.77
SNAPC3-205ENST00000467062 ANO9A1A5B4 782 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 LRRC10BA6NIK2 292 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 MGRN1O60291 552 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 FCER1AP12319 257 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 NR1D1P20393 614 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 PEX19P40855 299 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 PRPHP41219 470 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 TXKP42681 527 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 C2orf54Q08AI8 447 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 KCTD16Q68DU8 428 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 CCDC47Q96A33 483 aaKnown RBP19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 ZMYND12Q9H0C1 365 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 TRIM10Q9UDY6 481 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 BTAF1O14981 1849 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 MYH8P13535 1937 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 E7EVH7 732 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 CCDC178Q5BJE1 867 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 ANKRD20A8PQ5CZ79 823 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 CCDC122Q5T0U0 273 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 CABP7Q86V35 215 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 GPIHBP1Q8IV16 184 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 TSEN2Q8NCE0 465 aaKnown RBP19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 NEDD1Q8NHV4 660 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 GJD4Q96KN9 370 aaPredicted RBP19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 ZIM3Q96PE6 472 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 GPCPD1Q9NPB8 672 aa19.86■□□□□ 0.77
SNAPC3-205ENST00000467062 SCNN1DP51172 638 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms