RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 C1orf159Q96HA4 380 aa5.56□□□□□ -1.52
CCDC58-203ENST00000466854 DDAH1O94760 285 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 PLATP00750 562 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 GFRA1P56159 465 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 TNNI3KQ59H18 835 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 MCTP2Q6DN12 878 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 MCF2L2Q86YR7 1114 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 SLC43A3Q8NBI5 491 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 TMEM169Q96HH4 297 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 SSBP3Q9BWW4 388 aaPredicted RBP5.55□□□□□ -1.52
CCDC58-203ENST00000466854 ZNF408Q9H9D4 720 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 SMPD4Q9NXE4 827 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 ZNF652Q9Y2D9 606 aa5.55□□□□□ -1.52
CCDC58-203ENST00000466854 LOC105371045A0A1W2PR82 267 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 MROH6A6NGR9 719 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 DDX3XO00571 662 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC58-203ENST00000466854 FGRP09769 529 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 ZNF28P17035 718 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 RGS19P49795 217 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 GTF2A2P52657 109 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 PUM1Q14671 1186 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC58-203ENST00000466854 PPIL6Q8IXY8 311 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 TXNDC5Q8NBS9 432 aaKnown RBP5.54□□□□□ -1.52
CCDC58-203ENST00000466854 TMEM145Q8NBT3 493 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 ARRDC4Q8NCT1 418 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 LRP2BPQ9P2M1 347 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 PRKAG3Q9UGI9 489 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 INVSQ9Y283 1065 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 MYRFQ9Y2G1 1151 aa5.54□□□□□ -1.52
CCDC58-203ENST00000466854 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 MYO1BO43795 1136 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 TADA3O75528 432 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 CPP00450 1065 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 LTBRP36941 435 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 EMC4Q5J8M3 183 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 SLC35F1Q5T1Q4 408 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 ANKS3Q6ZW76 656 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 GPR20Q99678 358 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 TANGO6Q9C0B7 1094 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 CDIP1Q9H305 208 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 ST7Q9NRC1 585 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 WASF3Q9UPY6 502 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 PCDHA2Q9Y5H9 948 aa5.53□□□□□ -1.52
CCDC58-203ENST00000466854 H7BY64 318 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 HGSO14964 777 aaPredicted RBP5.52□□□□□ -1.53
CCDC58-203ENST00000466854 STK10O94804 968 aaKnown RBP5.52□□□□□ -1.53
CCDC58-203ENST00000466854 GRIA2P42262 883 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 KCNJ6P48051 423 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 NKX3-2P78367 333 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 KIAA2012Q0VF49 1180 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 LSAMPQ13449 338 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 FXNQ16595 210 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 LGI4Q8N135 537 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 HNRNPLLQ8WVV9 542 aaKnown RBP5.52□□□□□ -1.53
CCDC58-203ENST00000466854 CCDC140Q96MF4 163 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 ZSWIM3Q96MP5 696 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 SAMD11Q96NU1 681 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 TMPRSS5Q9H3S3 457 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 NGRNQ9NPE2 291 aaKnown RBP5.52□□□□□ -1.53
CCDC58-203ENST00000466854 DTLQ9NZJ0 730 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 COA3Q9Y2R0 106 aaPredicted RBP5.52□□□□□ -1.53
CCDC58-203ENST00000466854 NPFFR2Q9Y5X5 522 aa5.52□□□□□ -1.53
CCDC58-203ENST00000466854 B4GALT3O60512 393 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 EIF5BO60841 1220 aaKnown RBP5.51□□□□□ -1.53
CCDC58-203ENST00000466854 GJB6O95452 261 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 LRG1P02750 347 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 TNFRSF1AP19438 455 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 ATP2B1P20020 1258 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 SLC10A6Q3KNW5 377 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 STEAP3Q658P3 488 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 TEPPQ6URK8 271 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 TTC9BQ8N6N2 239 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.51□□□□□ -1.53
CCDC58-203ENST00000466854 MBD6Q96DN6 1003 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 TOE1Q96GM8 510 aaKnown RBP5.51□□□□□ -1.53
CCDC58-203ENST00000466854 C8orf49Q96NF6 230 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 YIPF4Q9BSR8 244 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 C1QTNF3Q9BXJ4 246 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 CLDND1Q9NY35 253 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 PCDHB4Q9Y5E5 795 aa5.51□□□□□ -1.53
CCDC58-203ENST00000466854 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 ZNF20P17024 532 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 GTF2F1P35269 517 aaKnown RBP eCLIP5.5□□□□□ -1.53
CCDC58-203ENST00000466854 MLLT6P55198 1093 aaPredicted RBP5.5□□□□□ -1.53
CCDC58-203ENST00000466854 CHRNA2Q15822 529 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 CPZQ66K79 652 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 BORAQ6PGQ7 559 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 FAM124AQ86V42 546 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 ZCCHC14Q8WYQ9 949 aaKnown RBP5.5□□□□□ -1.53
CCDC58-203ENST00000466854 LOXL4Q96JB6 756 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 CHAMP1Q96JM3 812 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 LCORQ96JN0 433 aaPredicted RBP5.5□□□□□ -1.53
CCDC58-203ENST00000466854 YTHDC1Q96MU7 727 aaKnown RBP5.5□□□□□ -1.53
CCDC58-203ENST00000466854 GMLQ99445 158 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 TRIM55Q9BYV6 548 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 EPB41L1Q9H4G0 881 aa5.5□□□□□ -1.53
CCDC58-203ENST00000466854 C1QTNF3-AMACRE9PGA6 284 aa5.49□□□□□ -1.53
CCDC58-203ENST00000466854 MATN3O15232 486 aa5.49□□□□□ -1.53
CCDC58-203ENST00000466854 PPP2R2AP63151 447 aa5.49□□□□□ -1.53
CCDC58-203ENST00000466854 PRAMEF18Q5VWM3 479 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms