RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 PES1O00541 588 aaKnown RBP15.13■□□□□ 0.01
UBE4B-206ENST00000466379 CTNND1O60716 968 aaKnown RBP15.13■□□□□ 0.01
UBE4B-206ENST00000466379 TPM2P07951 284 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 CYP3A4P08684 503 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 PSMC6P62333 389 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 CATSPER3Q86XQ3 398 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 CPXCR1Q8N123 301 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 ZKSCAN4Q969J2 545 aaPredicted RBP15.13■□□□□ 0.01
UBE4B-206ENST00000466379 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 SLF1Q9BQI6 1058 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 TANGO6Q9C0B7 1094 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 THAP9Q9H5L6 903 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 TBC1D7Q9P0N9 293 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 VAV3Q9UKW4 847 aa15.13■□□□□ 0.01
UBE4B-206ENST00000466379 ABCB11O95342 1321 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 TBX3O15119 743 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 CASP14P31944 242 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 CYP4A11Q02928 519 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 TRAF1Q13077 416 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 PPFIBP1Q86W92 1011 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 GPBP1Q86WP2 473 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 PRIMPOLQ96LW4 560 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 KCND1Q9NSA2 647 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 EML1O00423 815 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 NFIBO00712 420 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
UBE4B-206ENST00000466379 WDR46O15213 610 aaKnown RBP15.12■□□□□ 0.01
UBE4B-206ENST00000466379 NKRFO15226 690 aaKnown RBP eCLIP15.12■□□□□ 0.01
UBE4B-206ENST00000466379 SPATA31C1P0DKV0 1188 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 UBXN1Q04323 297 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 COASYQ13057 564 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 UPF1Q92900 1129 aaKnown RBP eCLIP15.12■□□□□ 0.01
UBE4B-206ENST00000466379 FAM20AQ96MK3 541 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 FGFBP2Q9BYJ0 223 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 LRRC27Q9C0I9 530 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 RAVER2Q9HCJ3 691 aaKnown RBP15.12■□□□□ 0.01
UBE4B-206ENST00000466379 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
UBE4B-206ENST00000466379 MAGEC2Q9UBF1 373 aaPredicted RBP15.12■□□□□ 0.01
UBE4B-206ENST00000466379 BICDL2A1A5D9 508 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 GYPCP04921 128 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 ICAM1P05362 532 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 VCAM1P19320 739 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.01
UBE4B-206ENST00000466379 SPP2Q13103 211 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 HAUS3Q68CZ6 603 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 MYRIPQ8NFW9 859 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 TSC1Q92574 1164 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 CNOT6LQ96LI5 555 aaKnown RBP15.11■□□□□ 0.01
UBE4B-206ENST00000466379 EMILIN3Q9NT22 766 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 PANK4Q9NVE7 773 aa15.11■□□□□ 0.01
UBE4B-206ENST00000466379 RNF225M0QZC1 329 aaPredicted RBP15.1■□□□□ 0.01
UBE4B-206ENST00000466379 CHMP2AO43633 222 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 FLOT1O75955 427 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 EEF1GP26641 437 aaKnown RBP15.1■□□□□ 0.01
UBE4B-206ENST00000466379 KCNJ6P48051 423 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 EHHADHQ08426 723 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 PABPC4Q13310 644 aaKnown RBP eCLIP15.1■□□□□ 0.01
UBE4B-206ENST00000466379 MTF1Q14872 753 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 TOGARAM2Q6ZUX3 1019 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 PRPF38AQ8NAV1 312 aaKnown RBP15.1■□□□□ 0.01
UBE4B-206ENST00000466379 WRNIP1Q96S55 665 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 GGA3Q9NZ52 723 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 DOCK1Q14185 1865 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 B4DLN1 442 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 ARHGAP6O43182 974 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 MFAP3LO75121 409 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 ALAS1P13196 640 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 CYP11B2P19099 503 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 EPS15P42566 896 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 SLC12A3P55017 1021 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 COBLL1Q53SF7 1204 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 ERMNQ8TAM6 284 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 LPAR1Q92633 364 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 RPAP3Q9H6T3 665 aaPredicted RBP15.1■□□□□ 0.01
UBE4B-206ENST00000466379 RGL1Q9NZL6 768 aa15.1■□□□□ 0.01
UBE4B-206ENST00000466379 ITIH6Q6UXX5 1313 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 SOWAHDA6NJG2 315 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 RPA1P27694 616 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 ARSHQ5FYA8 562 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 CENPPQ6IPU0 288 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 NOC3LQ8WTT2 800 aaKnown RBP15.09■□□□□ 0.01
UBE4B-206ENST00000466379 UBE2Q2Q8WVN8 375 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 CLEC4DQ8WXI8 215 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 TUBGCP2Q9BSJ2 902 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 DESI2Q9BSY9 194 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 ZHX3Q9H4I2 956 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 GPRC5DQ9NZD1 345 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 LGALS16A8MUM7 142 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 KRT18P05783 430 aaKnown RBP15.09■□□□□ 0.01
UBE4B-206ENST00000466379 ARP10275 920 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 PPP1R2P41236 205 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 HIRAP54198 1017 aaPredicted RBP15.09■□□□□ 0.01
UBE4B-206ENST00000466379 PRKG1Q13976 671 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 LRCH2Q5VUJ6 765 aa15.09■□□□□ 0.01
UBE4B-206ENST00000466379 DCAF15Q66K64 600 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms