RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ANAPC4Q9UJX5 808 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 NCOR1O75376 2440 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 WDR19Q8NEZ3 1342 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 TCF20Q9UGU0 1960 aaKnown RBP9.97□□□□□ -0.81
DDR1-242ENST00000465966 LRRC37A2A6NM11 1700 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 LGR5O75473 907 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 ARIH2O95376 493 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 CYP21A2P08686 494 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 STXBP2Q15833 593 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 RRP12Q5JTH9 1297 aaKnown RBP9.97□□□□□ -0.81
DDR1-242ENST00000465966 CCDC62Q6P9F0 684 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 EP400NLQ6ZTU2 488 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 STOX1Q6ZVD7 989 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 MCF2L2Q86YR7 1114 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 NSUN6Q8TEA1 469 aaKnown RBP9.97□□□□□ -0.81
DDR1-242ENST00000465966 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
DDR1-242ENST00000465966 KAT2BQ92831 832 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 JAKMIP1Q96N16 626 aaKnown RBP9.97□□□□□ -0.81
DDR1-242ENST00000465966 TTC14Q96N46 770 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 IWS1Q96ST2 819 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 ALG1Q9BT22 464 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 TCP11L1Q9NUJ3 509 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 HDAC6Q9UBN7 1215 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 PRKAG3Q9UGI9 489 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 ZMYM6O95789 1325 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 EMSYQ7Z589 1322 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 CHD7Q9P2D1 2997 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 MYO9BQ13459 2157 aa9.97□□□□□ -0.81
DDR1-242ENST00000465966 PRRC2BQ5JSZ5 2229 aaKnown RBP9.97□□□□□ -0.81
DDR1-242ENST00000465966 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.82
DDR1-242ENST00000465966 NCK2O43639 380 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 PDHBP11177 359 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 CPA1P15085 419 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 PSEN2P49810 448 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 NEK4P51957 841 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 NHLH1Q02575 133 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 ARHGAP1Q07960 439 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 ZNF543Q08ER8 600 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 LAMC2Q13753 1193 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 MFSD10Q14728 455 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 USH1GQ495M9 461 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 GPATCH4Q5T3I0 446 aaKnown RBP9.96□□□□□ -0.82
DDR1-242ENST00000465966 RNF20Q5VTR2 975 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 DHX37Q8IY37 1157 aaKnown RBP9.96□□□□□ -0.82
DDR1-242ENST00000465966 MYOCDQ8IZQ8 938 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 BANK1Q8NDB2 785 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 NEK9Q8TD19 979 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 MFSD14AQ96MC6 490 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 CTAGE1Q96RT6 745 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 C17orf80Q9BSJ5 609 aa9.96□□□□□ -0.82
DDR1-242ENST00000465966 MCM3APO60318 1980 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 H3BQ06 376 aaPredicted RBP9.95□□□□□ -0.82
DDR1-242ENST00000465966 ST18O60284 1047 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 FGRP09769 529 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 THPOP40225 353 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 KIAA0753Q2KHM9 967 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 TSGA10IPQ3SY00 556 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 EPC2Q52LR7 807 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 ZNF618Q5T7W0 954 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 ARHGEF16Q5VV41 709 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 PPTC7Q8NI37 304 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
DDR1-242ENST00000465966 PABPC5Q96DU9 382 aaKnown RBP9.95□□□□□ -0.82
DDR1-242ENST00000465966 FBXL18Q96ME1 805 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 YME1L1Q96TA2 773 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 RMDN3Q96TC7 470 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 TM6SF1Q9BZW5 370 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 MRVI1Q9Y6F6 885 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 ABCB11O95342 1321 aa9.95□□□□□ -0.82
DDR1-242ENST00000465966 GBF1Q92538 1859 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 H3BNC9 293 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 PPFIA4O75335 1185 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 EIF3JO75822 258 aaKnown RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 F2P00734 622 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 FGAP02671 866 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 HAND2P61296 217 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 HTRA4P83105 476 aaPredicted RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 GPM6BQ13491 265 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 ALX1Q15699 326 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 TCTN1Q2MV58 587 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
DDR1-242ENST00000465966 TBC1D10CQ8IV04 446 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 ADHFE1Q8IWW8 467 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 DBF4BQ8NFT6 615 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 SEPT8Q92599 483 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 TAAR1Q96RJ0 339 aa9.94□□□□□ -0.82
DDR1-242ENST00000465966 POP1Q99575 1024 aaKnown RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 NSUN3Q9H649 340 aaKnown RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 DDX41Q9UJV9 622 aaKnown RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 MRPL11Q9Y3B7 192 aaKnown RBP9.94□□□□□ -0.82
DDR1-242ENST00000465966 HAS3O00219 553 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 ZNF286BP0CG31 522 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms