RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 EPB41L1Q9H4G0 881 aa8.72□□□□□ -1.01
SSB-207ENST00000465871 RPL13P26373 211 aaKnown RBP8.71□□□□□ -1.02
SSB-207ENST00000465871 STAT5AP42229 794 aa8.71□□□□□ -1.02
SSB-207ENST00000465871 HSP90AA2PQ14568 343 aaPredicted RBP8.71□□□□□ -1.02
SSB-207ENST00000465871 ADAMTS17Q8TE56 1095 aa8.71□□□□□ -1.02
SSB-207ENST00000465871 LNPKQ9C0E8 428 aa8.71□□□□□ -1.02
SSB-207ENST00000465871 GPR27Q9NS67 375 aa8.71□□□□□ -1.02
SSB-207ENST00000465871 PCDHB4Q9Y5E5 795 aa8.71□□□□□ -1.02
SSB-207ENST00000465871 IQCA1LA6NCM1 817 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 DLX3O60479 287 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 DGKIO75912 1065 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 NKX3-2P78367 333 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 CR1LQ2VPA4 569 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 UBXN11Q5T124 520 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.7□□□□□ -1.02
SSB-207ENST00000465871 AARSD1Q9BTE6 412 aaKnown RBP8.7□□□□□ -1.02
SSB-207ENST00000465871 KRTAP4-2Q9BYR5 136 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 DTLQ9NZJ0 730 aa8.7□□□□□ -1.02
SSB-207ENST00000465871 TCRBV5S2A0A599 114 aa8.69□□□□□ -1.02
SSB-207ENST00000465871 TADA3O75528 432 aa8.69□□□□□ -1.02
SSB-207ENST00000465871 RAB33AQ14088 237 aa8.69□□□□□ -1.02
SSB-207ENST00000465871 PRRT2Q7Z6L0 340 aaPredicted RBP8.69□□□□□ -1.02
SSB-207ENST00000465871 ST13P5Q8NFI4 369 aaPredicted RBP8.69□□□□□ -1.02
SSB-207ENST00000465871 CDIP1Q9H305 208 aa8.69□□□□□ -1.02
SSB-207ENST00000465871 CNR2P34972 360 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 PLP2Q04941 152 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 PRR31Q5SQ13 230 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 RSPO2Q6UXX9 243 aaPredicted RBP8.68□□□□□ -1.02
SSB-207ENST00000465871 USP53Q70EK8 1073 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 STK32CQ86UX6 486 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 FERMT3Q86UX7 667 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 ARRDC4Q8NCT1 418 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 TOE1Q96GM8 510 aaKnown RBP8.68□□□□□ -1.02
SSB-207ENST00000465871 KRTAP4-11Q9BYQ6 195 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 ARHGEF4Q9NR80 690 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 DUSP10Q9Y6W6 482 aa8.68□□□□□ -1.02
SSB-207ENST00000465871 MAFKO60675 156 aa8.67□□□□□ -1.02
SSB-207ENST00000465871 FGFR1P11362 822 aa8.67□□□□□ -1.02
SSB-207ENST00000465871 ADAM9Q13443 819 aa8.67□□□□□ -1.02
SSB-207ENST00000465871 FAM26FQ5R3K3 315 aa8.67□□□□□ -1.02
SSB-207ENST00000465871 PHOSPHO1Q8TCT1 267 aa8.67□□□□□ -1.02
SSB-207ENST00000465871 PHF20Q9BVI0 1012 aa8.67□□□□□ -1.02
SSB-207ENST00000465871 MYOTQ9UBF9 498 aa8.67□□□□□ -1.02
SSB-207ENST00000465871 CNOT11Q9UKZ1 510 aaKnown RBP8.67□□□□□ -1.02
SSB-207ENST00000465871 MSCO60682 206 aa8.66□□□□□ -1.02
SSB-207ENST00000465871 ZC3H6P61129 1189 aaKnown RBP8.66□□□□□ -1.02
SSB-207ENST00000465871 EFEMP1Q12805 493 aa8.66□□□□□ -1.02
SSB-207ENST00000465871 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
SSB-207ENST00000465871 CYP4F22Q6NT55 531 aa8.66□□□□□ -1.02
SSB-207ENST00000465871 TEPPQ6URK8 271 aa8.66□□□□□ -1.02
SSB-207ENST00000465871 DDX1Q92499 740 aaKnown RBP8.66□□□□□ -1.02
SSB-207ENST00000465871 TRIM55Q9BYV6 548 aa8.66□□□□□ -1.02
SSB-207ENST00000465871 SMOC1Q9H4F8 434 aa8.66□□□□□ -1.02
SSB-207ENST00000465871 E9PSI1 815 aa8.65□□□□□ -1.02
SSB-207ENST00000465871 KRIT1O00522 736 aa8.65□□□□□ -1.02
SSB-207ENST00000465871 DCAF4Q8WV16 495 aa8.65□□□□□ -1.02
SSB-207ENST00000465871 PRODHO43272 600 aa8.64□□□□□ -1.03
SSB-207ENST00000465871 SPATS1Q496A3 300 aa8.64□□□□□ -1.03
SSB-207ENST00000465871 LRRC47Q8N1G4 583 aaKnown RBP8.64□□□□□ -1.03
SSB-207ENST00000465871 OSBP2Q969R2 916 aa8.64□□□□□ -1.03
SSB-207ENST00000465871 ZNF669Q96BR6 464 aaPredicted RBP8.64□□□□□ -1.03
SSB-207ENST00000465871 ZFYVE21Q9BQ24 234 aa8.64□□□□□ -1.03
SSB-207ENST00000465871 SLC6A20Q9NP91 592 aa8.64□□□□□ -1.03
SSB-207ENST00000465871 PPARGC1AQ9UBK2 798 aaKnown RBP8.64□□□□□ -1.03
SSB-207ENST00000465871 ASH2LQ9UBL3 628 aa8.64□□□□□ -1.03
SSB-207ENST00000465871 TRAV20A0A0B4J274 112 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 K7ESM1 405 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 STK10O94804 968 aaKnown RBP8.63□□□□□ -1.03
SSB-207ENST00000465871 PABPC1P11940 636 aaKnown RBP8.63□□□□□ -1.03
SSB-207ENST00000465871 ZNF28P17035 718 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 GRK2P25098 689 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 GRK3P35626 688 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 KRTAP10-2P60368 255 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 NTRK3Q16288 839 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 CKAP2LQ8IYA6 745 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 PIP4K2CQ8TBX8 421 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 ZSWIM3Q96MP5 696 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 JAM3Q9BX67 310 aa8.63□□□□□ -1.03
SSB-207ENST00000465871 MROH6A6NGR9 719 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 DDX3XO00571 662 aaKnown RBP eCLIP8.62□□□□□ -1.03
SSB-207ENST00000465871 LRG1P02750 347 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 ADRB1P08588 477 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 NFKB2Q00653 900 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 KIAA2012Q0VF49 1180 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 KIZQ2M2Z5 673 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 NAALADL2Q58DX5 795 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 MCTP2Q6DN12 878 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 STYK1Q6J9G0 422 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 KCNT2Q6UVM3 1135 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 NSMFQ6X4W1 530 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 LBX2Q6XYB7 198 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 FAM124AQ86V42 546 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
SSB-207ENST00000465871 TTLL11Q8NHH1 800 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 CLIC6Q96NY7 704 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 TMEM209Q96SK2 561 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 MSRB2Q9Y3D2 182 aa8.62□□□□□ -1.03
SSB-207ENST00000465871 GPR85P60893 370 aa8.61□□□□□ -1.03
SSB-207ENST00000465871 IFRD2Q12894 506 aaPredicted RBP8.61□□□□□ -1.03
SSB-207ENST00000465871 PRAMEF18Q5VWM3 479 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms