RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 PRR33A8MZF0 331 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 CYP26A1O43174 497 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 MED26O95402 600 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 ITIH2P19823 946 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 ZNF445P59923 1031 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 TRMT2AQ8IZ69 625 aaKnown RBP8.56□□□□□ -1.04
SPTA1-203ENST00000465741 JMYQ8N9B5 988 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 CHST7Q9NS84 486 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 GPATCH2Q9NW75 528 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 PIM2Q9P1W9 311 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 APEX2Q9UBZ4 518 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 AKT3Q9Y243 479 aa8.56□□□□□ -1.04
SPTA1-203ENST00000465741 PEAK1Q9H792 1746 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 ENPP3O14638 875 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 HTATSF1O43719 755 aaKnown RBP8.55□□□□□ -1.04
SPTA1-203ENST00000465741 CLCN7P51798 805 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 CALD1Q05682 793 aaKnown RBP8.55□□□□□ -1.04
SPTA1-203ENST00000465741 SNW1Q13573 536 aaKnown RBP8.55□□□□□ -1.04
SPTA1-203ENST00000465741 HSP90AA2PQ14568 343 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-203ENST00000465741 TMC3Q7Z5M5 1100 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 ARHGEF39Q8N4T4 335 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 ZSWIM2Q8NEG5 633 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 ADCY4Q8NFM4 1077 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 IL17REQ8NFR9 667 aa8.55□□□□□ -1.04
SPTA1-203ENST00000465741 NOL6Q9H6R4 1146 aaKnown RBP8.55□□□□□ -1.04
SPTA1-203ENST00000465741 IL16Q14005 1332 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 ALS2Q96Q42 1657 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 A0A1W2PQU0 124 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 PRAMEF1O95521 474 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 IL2RBP14784 551 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 HSD3B2P26439 372 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 GRB10Q13322 594 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 C1orf141Q5JVX7 400 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 CWF19L1Q69YN2 538 aaKnown RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 THAP5Q7Z6K1 395 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 HOMER1Q86YM7 354 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 ZDHHC13Q8IUH4 622 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 UNC5CLQ8IV45 518 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 FAM177A1Q8N128 213 aaPredicted RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 NLGN1Q8N2Q7 840 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 ZCRB1Q8TBF4 217 aaKnown RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 NETO1Q8TDF5 533 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 APPBP2Q92624 585 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 BRF1Q92994 677 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 TSR2Q969E8 191 aaKnown RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 IPO9Q96P70 1041 aaKnown RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 AARSD1Q9BTE6 412 aaKnown RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 MYH16Q9H6N6 1097 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 MIS18AQ9NYP9 233 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 CGGBP1Q9UFW8 167 aaPredicted RBP8.54□□□□□ -1.04
SPTA1-203ENST00000465741 EMC9Q9Y3B6 208 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 NHSL1Q5SYE7 1610 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 AFF2P51816 1311 aa8.54□□□□□ -1.04
SPTA1-203ENST00000465741 CAMTA1Q9Y6Y1 1673 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 CDC45O75419 566 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 GSNP06396 782 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 ITGAVP06756 1048 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 FOSL1P15407 271 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 GNAI1P63096 354 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 TMEM67Q5HYA8 995 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 TRIM59Q8IWR1 403 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 ZNF655Q8N720 491 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-203ENST00000465741 ZBTB38Q8NAP3 1195 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-203ENST00000465741 DAGLBQ8NCG7 672 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 HDAC8Q9BY41 377 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 TMEM260Q9NX78 707 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 SNX11Q9Y5W9 270 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 ST14Q9Y5Y6 855 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 ANKRD26Q9UPS8 1709 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 LRP6O75581 1613 aa8.53□□□□□ -1.04
SPTA1-203ENST00000465741 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 TRAV20A0A0B4J274 112 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 CCDC163A0A0D9SF12 145 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 CHL1O00533 1208 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 CYP27B1O15528 508 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 RNMTO43148 476 aaKnown RBP8.52□□□□□ -1.05
SPTA1-203ENST00000465741 ZNF853P0CG23 659 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 SRFP11831 508 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 PPP2R2AP63151 447 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 PPP2R5DQ14738 602 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 NKPD1Q17RQ9 610 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 CDKAL1Q5VV42 579 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 SPACA3Q8IXA5 215 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 IFNL2Q8IZJ0 200 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 IFT57Q9NWB7 429 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 PTCH2Q9Y6C5 1203 aa8.52□□□□□ -1.05
SPTA1-203ENST00000465741 MAP2P11137 1827 aaKnown RBP8.52□□□□□ -1.05
SPTA1-203ENST00000465741 COL5A2P05997 1499 aaPredicted RBP8.51□□□□□ -1.05
SPTA1-203ENST00000465741 USP54Q70EL1 1684 aa8.51□□□□□ -1.05
SPTA1-203ENST00000465741 EXOC5O00471 708 aa8.51□□□□□ -1.05
SPTA1-203ENST00000465741 PAX4O43316 350 aa8.51□□□□□ -1.05
SPTA1-203ENST00000465741 PHKG2P15735 406 aa8.51□□□□□ -1.05
SPTA1-203ENST00000465741 RBM6P78332 1123 aaKnown RBP8.51□□□□□ -1.05
SPTA1-203ENST00000465741 POU4F1Q01851 419 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms