RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 RNF4P78317 190 aa4.89□□□□□ -1.63
SCFD1-204ENST00000463622 OXR1Q8N573 874 aa4.89□□□□□ -1.63
SCFD1-204ENST00000463622 SYTL5Q8TDW5 730 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-204ENST00000463622 RAPGEF4Q8WZA2 1011 aa4.89□□□□□ -1.63
SCFD1-204ENST00000463622 G6PC3Q9BUM1 346 aa4.89□□□□□ -1.63
SCFD1-204ENST00000463622 MKRN2Q9H000 416 aaKnown RBP4.89□□□□□ -1.63
SCFD1-204ENST00000463622 BCL11AQ9H165 835 aa4.89□□□□□ -1.63
SCFD1-204ENST00000463622 ZMYM5Q9UJ78 669 aa4.89□□□□□ -1.63
SCFD1-204ENST00000463622 TCFL5Q9UL49 500 aa4.89□□□□□ -1.63
SCFD1-204ENST00000463622 PLEKHG2Q9H7P9 1386 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 FITM1A5D6W6 292 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 SYPP08247 313 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 VEGFAP15692 232 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-204ENST00000463622 CFPP27918 469 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 CNGB1Q14028 1251 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-204ENST00000463622 FBXW10Q5XX13 1052 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 CILP2Q8IUL8 1156 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 DAGLBQ8NCG7 672 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 PANK3Q9H999 370 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 FBXL21Q9UKT6 434 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 RGPD5Q99666 1765 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 LY75O60449 1722 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 PCDH11XQ9BZA7 1347 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 PCDH11YQ9BZA8 1340 aa4.88□□□□□ -1.63
SCFD1-204ENST00000463622 SSU72P8A0A1W2PR75 194 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 TMEM82A0PJX8 343 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 GLTPD2A6NH11 291 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 NOTOA8MTQ0 251 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 ETV2O00321 342 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-204ENST00000463622 ACRP10323 421 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 GYS1P13807 737 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 SDHBP21912 280 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 DALRD3Q5D0E6 543 aaKnown RBP4.87□□□□□ -1.63
SCFD1-204ENST00000463622 ZNF605Q86T29 641 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 ENOX1Q8TC92 643 aaKnown RBP4.87□□□□□ -1.63
SCFD1-204ENST00000463622 LINC01599Q8WXQ3 324 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 KCNN1Q92952 543 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 COG3Q96JB2 828 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 FAM86C1Q9NVL1 165 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 GFOD1Q9NXC2 390 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 RNF181Q9P0P0 153 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 ASAP1Q9ULH1 1129 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 PPT2Q9UMR5 302 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 ZNF281Q9Y2X9 895 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 C9IYK1 514 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 NPIPB6E9PJ23 425 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 NFIBO00712 420 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 TSPAN15O95858 294 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 DUSP4Q13115 394 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 KIR3DS1Q14943 382 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 BBS9Q3SYG4 887 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 HSP90AB2PQ58FF8 381 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 TDRD10Q5VZ19 366 aaKnown RBP4.87□□□□□ -1.63
SCFD1-204ENST00000463622 ATG14Q6ZNE5 492 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 RUFY4Q6ZNE9 571 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 SHISA4Q96DD7 197 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 TUBGCP6Q96RT7 1819 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 KAT6BQ8WYB5 2073 aa4.87□□□□□ -1.63
SCFD1-204ENST00000463622 TNFRSF10CO14798 259 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 FYB1O15117 783 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 SIGLEC6O43699 453 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 RPS6KA4O75676 772 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 TMEM253P0C7T8 217 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 PDE6BP35913 854 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 RGS19P49795 217 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 PCBP3P57721 371 aaKnown RBP4.86□□□□□ -1.63
SCFD1-204ENST00000463622 LRRFIP1Q32MZ4 808 aaKnown RBP4.86□□□□□ -1.63
SCFD1-204ENST00000463622 CCDC184Q52MB2 194 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 RNF111Q6ZNA4 994 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 SPPL2CQ8IUH8 684 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 LILRA2Q8N149 483 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 ZNF655Q8N720 491 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-204ENST00000463622 RNF34Q969K3 372 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 INTS4Q96HW7 963 aaKnown RBP4.86□□□□□ -1.63
SCFD1-204ENST00000463622 FERD3LQ96RJ6 166 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 PPP1R16BQ96T49 567 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 SGPP1Q9BX95 441 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 CHST7Q9NS84 486 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 YBX2Q9Y2T7 364 aaKnown RBP4.86□□□□□ -1.63
SCFD1-204ENST00000463622 MON2Q7Z3U7 1717 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 RTL1A6NKG5 1358 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 KCPQ6ZWJ8 1503 aa4.86□□□□□ -1.63
SCFD1-204ENST00000463622 MYOCOSA0A1B0GUC4 107 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 MEIS3P2A8K0S8 358 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 FOXN1O15353 648 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 RECKO95980 971 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 TM4SF1P30408 202 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 CTSKP43235 329 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 RAD51AP2Q09MP3 1159 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 AUHQ13825 339 aaKnown RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 RRS1Q15050 365 aaKnown RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 NR0B2Q15466 257 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 ZYXQ15942 572 aaKnown RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 SPOCD1Q6ZMY3 1216 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 CCDC81Q6ZN84 652 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 CEP128Q6ZU80 1094 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 LRRC56Q8IYG6 542 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-204ENST00000463622 ANKS4BQ8N8V4 417 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 HHIPL1Q96JK4 782 aa4.85□□□□□ -1.63
SCFD1-204ENST00000463622 MCOLN1Q9GZU1 580 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms