RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 CACNA1IQ9P0X4 2223 aa16■□□□□ 0.15
C9orf3-211ENST00000463372 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
C9orf3-211ENST00000463372 ITGB1P05556 798 aa16■□□□□ 0.15
C9orf3-211ENST00000463372 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
C9orf3-211ENST00000463372 NPR3P17342 541 aa16■□□□□ 0.15
C9orf3-211ENST00000463372 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
C9orf3-211ENST00000463372 SPPL3Q8TCT6 385 aa16■□□□□ 0.15
C9orf3-211ENST00000463372 MICAL1Q8TDZ2 1067 aa16■□□□□ 0.15
C9orf3-211ENST00000463372 ATP8B4Q8TF62 1192 aa16■□□□□ 0.15
C9orf3-211ENST00000463372 GPR108Q9NPR9 543 aa16■□□□□ 0.15
C9orf3-211ENST00000463372 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 C2CD4DB7Z1M9 353 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 PER2O15055 1255 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 ASGR2P07307 311 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 CASTP20810 708 aaKnown RBP15.99■□□□□ 0.15
C9orf3-211ENST00000463372 RBM10P98175 930 aaKnown RBP15.99■□□□□ 0.15
C9orf3-211ENST00000463372 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
C9orf3-211ENST00000463372 VARS2Q5ST30 1063 aaKnown RBP15.99■□□□□ 0.15
C9orf3-211ENST00000463372 C16orf86Q6ZW13 317 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 SUMF1Q8NBK3 374 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 POF1BQ8WVV4 589 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 KAT2BQ92831 832 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
C9orf3-211ENST00000463372 ALG1Q9BT22 464 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 APOL5Q9BWW9 433 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 S1PR5Q9H228 398 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
C9orf3-211ENST00000463372 SPEGQ15772 3267 aa15.99■□□□□ 0.15
C9orf3-211ENST00000463372 STK25O00506 426 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 KINO60870 393 aaKnown RBP15.98■□□□□ 0.15
C9orf3-211ENST00000463372 MMP3P08254 477 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 ARP10275 920 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 ZNF200P98182 395 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-211ENST00000463372 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 MUM1L1Q5H9M0 696 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 DHX37Q8IY37 1157 aaKnown RBP15.98■□□□□ 0.15
C9orf3-211ENST00000463372 AFG1LQ8WV93 481 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 APBB2Q92870 758 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 MPHOSPH6Q99547 160 aaKnown RBP15.98■□□□□ 0.15
C9orf3-211ENST00000463372 CDCA3Q99618 268 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-211ENST00000463372 KATNAL1Q9BW62 490 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 NYAP2Q9P242 653 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 FBXL21Q9UKT6 434 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
C9orf3-211ENST00000463372 NAV2Q8IVL1 2488 aa15.97■□□□□ 0.15
C9orf3-211ENST00000463372 TECP42680 631 aa15.97■□□□□ 0.15
C9orf3-211ENST00000463372 PDE4DQ08499 809 aa15.97■□□□□ 0.15
C9orf3-211ENST00000463372 ANKRD54Q6NXT1 300 aa15.97■□□□□ 0.15
C9orf3-211ENST00000463372 CRIPAKQ8N1N5 446 aa15.97■□□□□ 0.15
C9orf3-211ENST00000463372 VN1R2Q8NFZ6 395 aa15.97■□□□□ 0.15
C9orf3-211ENST00000463372 TTC3P53804 2025 aa15.97■□□□□ 0.15
C9orf3-211ENST00000463372 SP9P0CG40 484 aa15.96■□□□□ 0.15
C9orf3-211ENST00000463372 RFX1P22670 979 aa15.96■□□□□ 0.15
C9orf3-211ENST00000463372 PSEN2P49810 448 aa15.96■□□□□ 0.15
C9orf3-211ENST00000463372 IKQ13123 557 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-211ENST00000463372 C12orf60Q5U649 245 aa15.96■□□□□ 0.15
C9orf3-211ENST00000463372 RPAP2Q8IXW5 612 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-211ENST00000463372 SIX5Q8N196 739 aa15.96■□□□□ 0.15
C9orf3-211ENST00000463372 KLHL23Q8NBE8 558 aa15.96■□□□□ 0.15
C9orf3-211ENST00000463372 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-211ENST00000463372 LIMD1Q9UGP4 676 aa15.96■□□□□ 0.15
C9orf3-211ENST00000463372 CYP2D7A0A087X1C5 515 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 STAT2P52630 851 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 MFSD10Q14728 455 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 DGKDQ16760 1214 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 DUSP6Q16828 381 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 KIAA0753Q2KHM9 967 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 NECTIN4Q96NY8 510 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.95■□□□□ 0.14
C9orf3-211ENST00000463372 RC3H2Q9HBD1 1191 aaKnown RBP15.95■□□□□ 0.14
C9orf3-211ENST00000463372 ERVK-5Q9HDB9 667 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 USP18Q9UMW8 372 aa15.95■□□□□ 0.14
C9orf3-211ENST00000463372 TMEM232C9JQI7 657 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 BMP3P12645 472 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 HOXB8P17481 243 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-211ENST00000463372 MTX1Q13505 466 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 BAATQ14032 418 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-211ENST00000463372 CES5AQ6NT32 575 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 TMEM184AQ6ZMB5 413 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 LCORLQ8N3X6 602 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 TDRD5Q8NAT2 981 aaKnown RBP15.94■□□□□ 0.14
C9orf3-211ENST00000463372 CHURC1Q8WUH1 139 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 ANTXR1Q9H6X2 564 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 ATP8A2Q9NTI2 1148 aa15.94■□□□□ 0.14
C9orf3-211ENST00000463372 GH1P01241 217 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 PROS1P07225 676 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 SYCE2Q6PIF2 218 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 CHST3Q7LGC8 479 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 SERINC5Q86VE9 423 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 ZDHHC14Q8IZN3 488 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 PLCD3Q8N3E9 789 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 ZNF689Q96CS4 500 aaPredicted RBP15.93■□□□□ 0.14
C9orf3-211ENST00000463372 DDRGK1Q96HY6 314 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 MEIS3Q99687 375 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 POMKQ9H5K3 350 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
C9orf3-211ENST00000463372 KIAA1217Q5T5P2 1943 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 UNC79Q9P2D8 2635 aa15.93■□□□□ 0.14
C9orf3-211ENST00000463372 PTPDC1A2A3K4 754 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms