RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 COL20A1Q9P218 1284 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 CCPG1Q9ULG6 757 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 MRPL11Q9Y3B7 192 aaKnown RBP14.31□□□□□ -0.12
VAPB-203ENST00000463370 PVALEFA0A1B0GWK0 134 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 TBX3O15119 743 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 GYPCP04921 128 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 ICAM1P05362 532 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 VCAM1P19320 739 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 HIRAP54198 1017 aaPredicted RBP14.31□□□□□ -0.12
VAPB-203ENST00000463370 FILIP1LQ4L180 1135 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 DLK2Q6UY11 383 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 CPXCR1Q8N123 301 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 CCDC47Q96A33 483 aaKnown RBP14.31□□□□□ -0.12
VAPB-203ENST00000463370 HOOK2Q96ED9 719 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 SLF1Q9BQI6 1058 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 NT5C3AQ9H0P0 336 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 KDM3AQ9Y4C1 1321 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 WDR46O15213 610 aaKnown RBP14.3□□□□□ -0.12
VAPB-203ENST00000463370 EPS15P42566 896 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 FXR1P51114 621 aaKnown RBP eCLIP14.3□□□□□ -0.12
VAPB-203ENST00000463370 TERF1P54274 439 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 CYP4A11Q02928 519 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 SPAG1Q07617 926 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 SPP2Q13103 211 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 ARSHQ5FYA8 562 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 ARHGAP27Q6ZUM4 889 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 WNK4Q96J92 1243 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 BAG1Q99933 345 aaPredicted RBP14.3□□□□□ -0.12
VAPB-203ENST00000463370 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 THAP9Q9H5L6 903 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 RAVER2Q9HCJ3 691 aaKnown RBP14.3□□□□□ -0.12
VAPB-203ENST00000463370 CYP11B2P19099 503 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 CASP14P31944 242 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 SLC12A3P55017 1021 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 COASYQ13057 564 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 COBLL1Q53SF7 1204 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 PRPF38AQ8NAV1 312 aaKnown RBP14.3□□□□□ -0.12
VAPB-203ENST00000463370 CCDC112Q8NEF3 446 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 CLEC4DQ8WXI8 215 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 TSC1Q92574 1164 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 LPAR1Q92633 364 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 FAM20AQ96MK3 541 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 GGA3Q9NZ52 723 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 GPRC5DQ9NZD1 345 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 RGL1Q9NZL6 768 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 TBC1D7Q9P0N9 293 aa14.3□□□□□ -0.12
VAPB-203ENST00000463370 AKR1B15C9JRZ8 316 aaPredicted RBP14.29□□□□□ -0.12
VAPB-203ENST00000463370 FLOT1O75955 427 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 KCNJ6P48051 423 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 MTF1Q14872 753 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 CENPPQ6IPU0 288 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 TOGARAM2Q6ZUX3 1019 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 GPBP1Q86WP2 473 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 ZNF592Q92610 1267 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 ABCB11O95342 1321 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 RIOK3O14730 519 aaKnown RBP14.29□□□□□ -0.12
VAPB-203ENST00000463370 ARP10275 920 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 UBXN1Q04323 297 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 TRAF1Q13077 416 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 PABPC4Q13310 644 aaKnown RBP eCLIP14.29□□□□□ -0.12
VAPB-203ENST00000463370 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
VAPB-203ENST00000463370 PTPN14Q15678 1187 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 MUM1L1Q5H9M0 696 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 MYRIPQ8NFW9 859 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 IL31RAQ8NI17 732 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 PRIMPOLQ96LW4 560 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
VAPB-203ENST00000463370 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
VAPB-203ENST00000463370 CHMP2AO43633 222 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 MFAP3LO75121 409 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 EEF1GP26641 437 aaKnown RBP14.28□□□□□ -0.12
VAPB-203ENST00000463370 RPA1P27694 616 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 HSD17B4P51659 736 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 HAUS3Q68CZ6 603 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 OTOP1Q7RTM1 612 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 ZNF507Q8TCN5 953 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
VAPB-203ENST00000463370 SLC38A10Q9HBR0 1119 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 ZNF112Q9UJU3 913 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 PCDHA2Q9Y5H9 948 aa14.28□□□□□ -0.12
VAPB-203ENST00000463370 BICDL2A1A5D9 508 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 SOWAHDA6NJG2 315 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 B4DLN1 442 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.12
VAPB-203ENST00000463370 PSMD10O75832 226 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 ALAS1P13196 640 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 PTPRAP18433 802 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 CEP55Q53EZ4 464 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 PPFIBP1Q86W92 1011 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 SCYL3Q8IZE3 742 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.12
VAPB-203ENST00000463370 ANKRD20A12PQ8NF67 263 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 EIF2AK1Q9BQI3 630 aaKnown RBP14.27□□□□□ -0.12
VAPB-203ENST00000463370 ITIH6Q6UXX5 1313 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.12
VAPB-203ENST00000463370 LGALS16A8MUM7 142 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms