RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 IL31RAQ8NI17 732 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
HDAC1-203ENST00000463172 BRF1Q92994 677 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 NOC4LQ9BVI4 516 aaKnown RBP15.04■□□□□ -0
HDAC1-203ENST00000463172 IL23AQ9NPF7 189 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 BRPF3Q9ULD4 1205 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 SZT2Q5T011 3432 aa15.04■□□□□ -0
HDAC1-203ENST00000463172 CNTNAP5Q8WYK1 1306 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 RGS20O76081 388 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 FOSP01100 380 aaPredicted RBP15.03■□□□□ -0
HDAC1-203ENST00000463172 PFKMP08237 780 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 CSF2RAP15509 400 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 UBA1P22314 1058 aaKnown RBP15.03■□□□□ -0
HDAC1-203ENST00000463172 CYP2C18P33260 490 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 ADCY7P51828 1080 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 ZNF697Q5TEC3 545 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 FAM109BQ6ICB4 259 aaPredicted RBP15.03■□□□□ -0
HDAC1-203ENST00000463172 SESTD1Q86VW0 696 aa15.03■□□□□ -0
HDAC1-203ENST00000463172 GPKOWQ92917 476 aaPredicted RBP eCLIP15.03■□□□□ -0
HDAC1-203ENST00000463172 INPP4AQ96PE3 977 aaPredicted RBP15.03■□□□□ -0
HDAC1-203ENST00000463172 TRMT13Q9NUP7 481 aaKnown RBP15.03■□□□□ -0
HDAC1-203ENST00000463172 V9GY48 417 aaPredicted RBP15.03■□□□□ -0
HDAC1-203ENST00000463172 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.02■□□□□ -0
HDAC1-203ENST00000463172 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.02■□□□□ -0
HDAC1-203ENST00000463172 hCG_1642624A0A1W2PR95 340 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 FGBP02675 491 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 RFC2P35250 354 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 PSEN2P49810 448 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 APOBRQ0VD83 1088 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 COL9A3Q14050 684 aaPredicted RBP15.02■□□□□ -0
HDAC1-203ENST00000463172 PTGISQ16647 500 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 MCTP2Q6DN12 878 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 METTL7BQ6UX53 244 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 GPRASP2Q96D09 838 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 SENP7Q9BQF6 1050 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 RTEL1Q9NZ71 1219 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 CYP46A1Q9Y6A2 500 aa15.02■□□□□ -0
HDAC1-203ENST00000463172 SPATA31C2B4DYI2 1134 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 PITPNM1O00562 1244 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 MAFGO15525 162 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 F2P00734 622 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 CYP2C9P11712 490 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 ACTN1P12814 892 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 EPHB4P54760 987 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 CCL23P55773 120 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 MRPS9P82933 396 aaKnown RBP15.01□□□□□ -0.01
HDAC1-203ENST00000463172 MFSD10Q14728 455 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 KIAA0753Q2KHM9 967 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 WWC2Q6AWC2 1192 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 RUFY3Q7L099 469 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 CAGE1Q8TC20 777 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.014e-10■□□□□ 9.9
HDAC1-203ENST00000463172 ALG1Q9BT22 464 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 USP26Q9BXU7 913 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 TM6SF1Q9BZW5 370 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 RIC8AQ9NPQ8 531 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 BARHL2Q9NY43 387 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 ZNF215Q9UL58 517 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-203ENST00000463172 PCDHA6Q9UN73 950 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 PCDHA8Q9Y5H6 950 aa15.01□□□□□ -0.01
HDAC1-203ENST00000463172 KAT6AQ92794 2004 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 TMEM265A0A087WTH1 108 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 SMCO2A6NFE2 343 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 PARNO95453 639 aaKnown RBP15□□□□□ -0.01
HDAC1-203ENST00000463172 ZNF286BP0CG31 522 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 HOXD8P13378 290 aaPredicted RBP15□□□□□ -0.01
HDAC1-203ENST00000463172 CPA1P15085 419 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 AP3B2Q13367 1082 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 UBE2SQ16763 222 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 HSDL1Q3SXM5 330 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 TMEM240Q5SV17 173 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 CPLX2Q6PUV4 134 aaKnown RBP15□□□□□ -0.01
HDAC1-203ENST00000463172 ZNF365Q70YC5 407 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 AGXT2Q9BYV1 514 aa15□□□□□ -0.01
HDAC1-203ENST00000463172 NID2Q14112 1375 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 TRIP12Q14669 1992 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-203ENST00000463172 SORBS3O60504 671 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 GNAT1P11488 350 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 SCG2P13521 617 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 GNA11P29992 359 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 CDC27P30260 824 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
HDAC1-203ENST00000463172 SP2Q02086 613 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 FUT2Q10981 343 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 MTMR1Q13613 665 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 PFKFB3Q16875 520 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-203ENST00000463172 CYFIP1Q7L576 1253 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 TRIM22Q8IYM9 498 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 CCDC148Q8NFR7 591 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 AFAP1L1Q8TED9 768 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 HERVK_113Q902F9 699 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 KAT2BQ92831 832 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 ZFP91Q96JP5 570 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-203ENST00000463172 ZSWIM6Q9HCJ5 1215 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 C6orf50Q9HD87 102 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 GTF2IRD1Q9UHL9 959 aa14.99□□□□□ -0.01
HDAC1-203ENST00000463172 LAMA2P24043 3122 aaKnown RBP14.99□□□□□ -0.01
HDAC1-203ENST00000463172 TANC1Q9C0D5 1861 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 DOCK5Q9H7D0 1870 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms