RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 FAM20AQ96MK3 541 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 PPP2R2CQ9Y2T4 447 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 ZNF536O15090 1300 aa11.35□□□□□ -0.59
MSH5-211ENST00000463144 NPHP3-ACAD11A0A0J9YXS1 232 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 BICDL2A1A5D9 508 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 LGALS16A8MUM7 142 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 PPP1R2P41236 205 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 PSMC6P62333 389 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 TRAF1Q13077 416 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 LRRC41Q15345 812 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 TRIM65Q6PJ69 517 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 SLC30A10Q6XR72 485 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 LDHDQ86WU2 507 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 GUF1Q8N442 669 aaKnown RBP11.34□□□□□ -0.59
MSH5-211ENST00000463144 MB21D1Q8N884 522 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 WDR18Q9BV38 432 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 FGFBP2Q9BYJ0 223 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 LRRC27Q9C0I9 530 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 HACL1Q9UJ83 578 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 POTEFA5A3E0 1075 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 SOWAHDA6NJG2 315 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 GCOM1H8Y6P7 765 aaPredicted RBP11.34□□□□□ -0.59
MSH5-211ENST00000463144 SLC26A4O43511 780 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 POLR2MP0CAP2 368 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 FECHP22830 423 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 COASYQ13057 564 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 PSMD2Q13200 908 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 NBPF12Q5TAG4 269 aaPredicted RBP11.34□□□□□ -0.59
MSH5-211ENST00000463144 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 POTEGQ6S5H5 508 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 POTEEQ6S8J3 1075 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 RAD9BQ6WBX8 426 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 CNOT6LQ96LI5 555 aaKnown RBP11.34□□□□□ -0.59
MSH5-211ENST00000463144 AGBL1Q96MI9 1066 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 TUBGCP2Q9BSJ2 902 aa11.34□□□□□ -0.59
MSH5-211ENST00000463144 MRPL11Q9Y3B7 192 aaKnown RBP11.34□□□□□ -0.59
MSH5-211ENST00000463144 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.34□□□□□ -0.595e-8■■□□□ 12.7
MSH5-211ENST00000463144 EML1O00423 815 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 MEIS1O00470 390 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 SSBP05455 408 aaKnown RBP eCLIP11.33□□□□□ -0.6
MSH5-211ENST00000463144 CYP11B2P19099 503 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 RPA1P27694 616 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 ZNF76P36508 570 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 SLC12A3P55017 1021 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 UBXN2AP68543 259 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 TNFAIP1Q13829 316 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 SYT10Q6XYQ8 523 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 TEX2Q8IWB9 1127 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 FEZ1Q99689 392 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 DEFB129Q9H1M3 183 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 MAGEC2Q9UBF1 373 aaPredicted RBP11.33□□□□□ -0.6
MSH5-211ENST00000463144 PCDHA2Q9Y5H9 948 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 B4DLN1 442 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 KIF2AO00139 706 aaPredicted RBP11.33□□□□□ -0.6
MSH5-211ENST00000463144 FANCGO15287 622 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 CCP110O43303 1012 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 CTIFO43310 598 aaKnown RBP11.33□□□□□ -0.6
MSH5-211ENST00000463144 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
MSH5-211ENST00000463144 CACNB1Q02641 598 aaPredicted RBP11.33□□□□□ -0.6
MSH5-211ENST00000463144 GPBP1Q86WP2 473 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
MSH5-211ENST00000463144 DESI2Q9BSY9 194 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 KIAA1683Q9H0B3 1180 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 ABCB11O95342 1321 aa11.33□□□□□ -0.6
MSH5-211ENST00000463144 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 CTNND1O60716 968 aaKnown RBP11.32□□□□□ -0.6
MSH5-211ENST00000463144 KIF4BQ2VIQ3 1234 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 CNGA4Q8IV77 575 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 KIF18AQ8NI77 898 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 ABHD10Q9NUJ1 306 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 RBBP6Q7Z6E9 1792 aaKnown RBP11.32□□□□□ -0.6
MSH5-211ENST00000463144 TTC26A0AVF1 554 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 FRMD3A2A2Y4 597 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
MSH5-211ENST00000463144 ICAM1P05362 532 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 DNM2P50570 870 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 ETF1P62495 437 aaKnown RBP11.32□□□□□ -0.6
MSH5-211ENST00000463144 ERVK-24P63145 666 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 FAM26FQ5R3K3 315 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 HAUS3Q68CZ6 603 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 OTOP1Q7RTM1 612 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 PRPF38AQ8NAV1 312 aaKnown RBP11.32□□□□□ -0.6
MSH5-211ENST00000463144 CLEC4DQ8WXI8 215 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 NAA15Q9BXJ9 866 aaKnown RBP11.32□□□□□ -0.6
MSH5-211ENST00000463144 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
MSH5-211ENST00000463144 COL20A1Q9P218 1284 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms