RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 R3HCC1Q9Y3T6 440 aaKnown RBP9.27□□□□□ -0.93
UBE4B-204ENST00000462658 OVOS2A0A0G2JMS6 1433 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 CYP27B1O15528 508 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 HSP90AB1P08238 724 aaKnown RBP9.26□□□□□ -0.93
UBE4B-204ENST00000462658 CD8BP10966 210 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 SRFP11831 508 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-204ENST00000462658 KIAA1211LQ6NV74 962 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 C6orf15Q6UXA7 325 aaPredicted RBP9.26□□□□□ -0.93
UBE4B-204ENST00000462658 VSIG10LQ86VR7 867 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 C7orf61Q8IZ16 206 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 CELF2-AS1Q8N7Q2 184 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 FLCNQ8NFG4 579 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 MISP3Q96FF7 219 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 ST7Q9NRC1 585 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 SMC4Q9NTJ3 1288 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 GFOD1Q9NXC2 390 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 ZNF451Q9Y4E5 1061 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 PCDHB12Q9Y5F1 795 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 SPATA31A5Q5VU36 1347 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 SPATA31A7Q8IWB4 1347 aa9.26□□□□□ -0.93
UBE4B-204ENST00000462658 BTBD11A6QL63 1104 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 TPP2P29144 1249 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-204ENST00000462658 KRT24Q2M2I5 525 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 BBS9Q3SYG4 887 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 ASB11Q8WXH4 323 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 SMARCC1Q92922 1105 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-204ENST00000462658 GPATCH2Q9NW75 528 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 ANGEL1Q9UNK9 670 aaKnown RBP9.25□□□□□ -0.93
UBE4B-204ENST00000462658 PCDH11XQ9BZA7 1347 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 PCDH11YQ9BZA8 1340 aa9.25□□□□□ -0.93
UBE4B-204ENST00000462658 MEIS1O00470 390 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 PRAMEF1O95521 474 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 CLEC16AQ2KHT3 1053 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 ZKSCAN2Q63HK3 967 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 THAP5Q7Z6K1 395 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 CKAP2LQ8IYA6 745 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 STK11IPQ8N1F8 1099 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 HAUS7Q99871 368 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 ASCC2Q9H1I8 757 aaPredicted RBP9.24□□□□□ -0.93
UBE4B-204ENST00000462658 TRIT1Q9H3H1 467 aaKnown RBP9.24□□□□□ -0.93
UBE4B-204ENST00000462658 ZFP64Q9NPA5 681 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 NOB1Q9ULX3 412 aaKnown RBP9.24□□□□□ -0.93
UBE4B-204ENST00000462658 THRAP3Q9Y2W1 955 aaKnown RBP9.24□□□□□ -0.93
UBE4B-204ENST00000462658 TNS1Q9HBL0 1735 aaKnown RBP9.24□□□□□ -0.93
UBE4B-204ENST00000462658 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
UBE4B-204ENST00000462658 LRRC37A3O60309 1634 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 PARP4Q9UKK3 1724 aaKnown RBP9.23□□□□□ -0.93
UBE4B-204ENST00000462658 TCERG1O14776 1098 aaKnown RBP9.23□□□□□ -0.93
UBE4B-204ENST00000462658 IPO8O15397 1037 aaKnown RBP9.23□□□□□ -0.93
UBE4B-204ENST00000462658 CBFA2T2O43439 604 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 DDAH1O94760 285 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 WNT11O96014 354 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 EIF4A1P60842 406 aaKnown RBP9.23□□□□□ -0.93
UBE4B-204ENST00000462658 IKZF1Q13422 519 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 TSPYL5Q86VY4 417 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-204ENST00000462658 FAM178BQ8IXR5 827 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 BRF1Q92994 677 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 FGD4Q96M96 766 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 DRC1Q96MC2 740 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
UBE4B-204ENST00000462658 SLC52A2Q9HAB3 445 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 PAK6Q9NQU5 681 aaPredicted RBP9.23□□□□□ -0.93
UBE4B-204ENST00000462658 KIF16BQ96L93 1317 aa9.23□□□□□ -0.93
UBE4B-204ENST00000462658 EXOC5O00471 708 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 KCNQ3O43525 872 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 SIGLEC6O43699 453 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 EPHX1P07099 455 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 CD247P20963 164 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 FXNQ16595 210 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 CREG2Q8IUH2 290 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 HDAC8Q9BY41 377 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 GP6Q9HCN6 339 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-204ENST00000462658 DISP2A7MBM2 1401 aa9.22□□□□□ -0.93
UBE4B-204ENST00000462658 KDM6AO15550 1401 aaPredicted RBP9.22□□□□□ -0.93
UBE4B-204ENST00000462658 ERVV-2B6SEH9 535 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 GJB6O95452 261 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 ESR1P03372 595 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 ZNF445P59923 1031 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 RBL2Q08999 1139 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 RAB33AQ14088 237 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 GAB4Q2WGN9 574 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 ANKRD39Q53RE8 183 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 HEATR6Q6AI08 1181 aaKnown RBP9.21□□□□□ -0.94
UBE4B-204ENST00000462658 MRM1Q6IN84 353 aaKnown RBP9.21□□□□□ -0.94
UBE4B-204ENST00000462658 ATF7IPQ6VMQ6 1270 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 TP53INP2Q8IXH6 220 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 PANK1Q8TE04 598 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 ARHGAP45Q92619 1136 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 ARMC5Q96C12 935 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 TRIM55Q9BYV6 548 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 KLHL25Q9H0H3 589 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 CARS2Q9HA77 564 aaKnown RBP9.21□□□□□ -0.94
UBE4B-204ENST00000462658 PRDM7Q9NQW5 492 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 CHST7Q9NS84 486 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 SUSD2Q9UGT4 822 aa9.21□□□□□ -0.94
UBE4B-204ENST00000462658 DUSP13Q9UII6 198 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms