RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 RRAGBQ5VZM2 374 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 USP17L6PQ6QN14 398 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 ZNF662Q6ZS27 426 aa13.89□□□□□ -0.19
COL4A6-204ENST00000461897 POLR2AP24928 1970 aaKnown RBP13.89□□□□□ -0.19
COL4A6-204ENST00000461897 MEIS2O14770 477 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 OPLAHO14841 1288 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 TDP2O95551 362 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 RPN1P04843 607 aaKnown RBP13.88□□□□□ -0.19
COL4A6-204ENST00000461897 OR52Z1P0C646 297 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 OAS2P29728 719 aaKnown RBP13.88□□□□□ -0.19
COL4A6-204ENST00000461897 AMPD2Q01433 879 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 BEND6Q5SZJ8 279 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-204ENST00000461897 DCAF15Q66K64 600 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 DTHD1Q6ZMT9 781 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 P2RX7Q99572 595 aaKnown RBP13.88□□□□□ -0.19
COL4A6-204ENST00000461897 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-204ENST00000461897 GLT8D2Q9H1C3 349 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
COL4A6-204ENST00000461897 A0A0U1RQJ8 604 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 SLC37A4O43826 429 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 PLA2G6O60733 806 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 CDC25AP30304 524 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 ADSSL1Q8N142 457 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 CPLX3Q8WVH0 158 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 ATRIPQ8WXE1 791 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 RANBP17Q9H2T7 1088 aaKnown RBP13.87□□□□□ -0.19
COL4A6-204ENST00000461897 FBXO28Q9NVF7 368 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 FZD1Q9UP38 647 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 PP2D1A8MPX8 630 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 DGKZQ13574 1117 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 MUM1L1Q5H9M0 696 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 IRF2BP1Q8IU81 584 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 SLC35F6Q8N357 371 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 EXOC4Q96A65 974 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 MTMR9Q96QG7 549 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 DNAJC7Q99615 494 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 KIAA1683Q9H0B3 1180 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 BLZF1Q9H2G9 400 aa13.87□□□□□ -0.19
COL4A6-204ENST00000461897 RNF225M0QZC1 329 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-204ENST00000461897 ERLIN1O75477 346 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 EEF1GP26641 437 aaKnown RBP13.86□□□□□ -0.19
COL4A6-204ENST00000461897 CCT6AP40227 531 aaKnown RBP13.86□□□□□ -0.19
COL4A6-204ENST00000461897 C9orf131Q5VYM1 1079 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 ILDR2Q71H61 639 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 FAM160B2Q86V87 743 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 SCYL3Q8IZE3 742 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 ACRBPQ8NEB7 543 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 ZNF507Q8TCN5 953 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 ZKSCAN4Q969J2 545 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-204ENST00000461897 WRNIP1Q96S55 665 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 ANO3Q9BYT9 981 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 CCSER1Q9C0I3 900 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 THAP9Q9H5L6 903 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 DISC1Q9NRI5 854 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 FEM1BQ9UK73 627 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 L1RE1Q9UN81 338 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 PPP2R3BQ9Y5P8 575 aa13.86□□□□□ -0.19
COL4A6-204ENST00000461897 PITPNM2Q9BZ72 1349 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 LGALS16A8MUM7 142 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 PRCPP42785 496 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 GPS2Q13227 327 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 AP3B2Q13367 1082 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 NAALADL2Q58DX5 795 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 HDXQ7Z353 690 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 NOC3LQ8WTT2 800 aaKnown RBP13.85□□□□□ -0.19
COL4A6-204ENST00000461897 LPAR1Q92633 364 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 GBP3Q9H0R5 595 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 ADARB2Q9NS39 739 aaKnown RBP13.85□□□□□ -0.19
COL4A6-204ENST00000461897 TAB2Q9NYJ8 693 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 PARP14Q460N5 1801 aa13.85□□□□□ -0.19
COL4A6-204ENST00000461897 WDR46O15213 610 aaKnown RBP13.84□□□□□ -0.19
COL4A6-204ENST00000461897 RHOBTB3O94955 611 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 KRT9P35527 623 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 MTMR2Q13614 643 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CALCRLQ16602 461 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CCDC174Q6PII3 467 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 OR8K1Q8NGG5 319 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CRYGNQ8WXF5 182 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 STAMQ92783 540 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 VPS16Q9H269 839 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 REXO2Q9Y3B8 237 aaKnown RBP13.84□□□□□ -0.19
COL4A6-204ENST00000461897 EPN1Q9Y6I3 576 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-204ENST00000461897 PAPPA2Q9BXP8 1791 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CTAGE15A4D2H0 777 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 POLR3GO15318 223 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-204ENST00000461897 KLRC4O43908 158 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 NDUFA10O95299 355 aa13.84□□□□□ -0.19
COL4A6-204ENST00000461897 CTAGE8P0CG41 777 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms