RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 STK24Q9Y6E0 443 aa22.54■■□□□ 1.2
CCM2-203ENST00000461377 PHF20L1A8MW92 1017 aa22.54■■□□□ 1.2
CCM2-203ENST00000461377 RNF225M0QZC1 329 aaPredicted RBP22.54■■□□□ 1.2
CCM2-203ENST00000461377 MSH4O15457 936 aa22.54■■□□□ 1.2
CCM2-203ENST00000461377 FOXR2Q6PJQ5 311 aa22.54■■□□□ 1.2
CCM2-203ENST00000461377 ERMNQ8TAM6 284 aa22.54■■□□□ 1.2
CCM2-203ENST00000461377 L2HGDHQ9H9P8 463 aa22.54■■□□□ 1.2
CCM2-203ENST00000461377 TEPSINQ96N21 525 aa22.53■■□□□ 1.2
CCM2-203ENST00000461377 DESI2Q9BSY9 194 aa22.53■■□□□ 1.2
CCM2-203ENST00000461377 PANK4Q9NVE7 773 aa22.53■■□□□ 1.2
CCM2-203ENST00000461377 MRPL11Q9Y3B7 192 aaKnown RBP22.53■■□□□ 1.2
CCM2-203ENST00000461377 B4DLN1 442 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 GCOM1H8Y6P7 765 aaPredicted RBP22.52■■□□□ 1.2
CCM2-203ENST00000461377 CFBP00751 764 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 SSBP05455 408 aaKnown RBP eCLIP22.52■■□□□ 1.2
CCM2-203ENST00000461377 CCDC175P0C221 793 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 POLR2MP0CAP2 368 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 LRRC63Q05C16 580 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 NCAPH2Q6IBW4 605 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 CCDC84Q86UT8 332 aaPredicted RBP22.52■■□□□ 1.2
CCM2-203ENST00000461377 TMTC1Q8IUR5 882 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 TBC1D5Q92609 795 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 VAV3Q9UKW4 847 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 IGLV3-22A0A075B6J6 115 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 EGFRP00533 1210 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 CYP11B2P19099 503 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 RPA1P27694 616 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 TNFAIP1Q13829 316 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 GPBP1Q86WP2 473 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 CATSPER3Q86XQ3 398 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 FBXO41Q8TF61 875 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 FBXO28Q9NVF7 368 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 DNAI1Q9UI46 699 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 ADGRG1Q9Y653 693 aa22.52■■□□□ 1.2
CCM2-203ENST00000461377 ABCB11O95342 1321 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 POTEFA5A3E0 1075 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 POTEIP0CG38 1075 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 KRT9P35527 623 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 ZNF76P36508 570 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 MTIF2P46199 727 aaKnown RBP22.51■■□□□ 1.19
CCM2-203ENST00000461377 SLC12A3P55017 1021 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 MIIPQ5JXC2 388 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 FAM26FQ5R3K3 315 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 POTEGQ6S5H5 508 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 POTEEQ6S8J3 1075 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 CCDC125Q86Z20 511 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 GLIS3Q8NEA6 775 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 CYP2W1Q8TAV3 490 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 EEF2KMTQ96G04 330 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 LTBP3Q9NS15 1303 aa22.51■■□□□ 1.19
CCM2-203ENST00000461377 PES1O00541 588 aaKnown RBP22.5■■□□□ 1.19
CCM2-203ENST00000461377 FGFR1OPO95684 399 aaKnown RBP22.5■■□□□ 1.19
CCM2-203ENST00000461377 SPATA31C1P0DKV0 1188 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 PTGER2P43116 358 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 ERVK-24P63145 666 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 CCDC65Q8IXS2 484 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 ZNF341Q9BYN7 854 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 SCAF8Q9UPN6 1271 aaKnown RBP22.5■■□□□ 1.19
CCM2-203ENST00000461377 TTC26A0AVF1 554 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 FANCGO15287 622 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 LDHDQ86WU2 507 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 MYOCDQ8IZQ8 938 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 ANKRD7Q92527 254 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 NOC4LQ9BVI4 516 aaKnown RBP22.5■■□□□ 1.19
CCM2-203ENST00000461377 DEFB129Q9H1M3 183 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 MRPL44Q9H9J2 332 aaKnown RBP22.5■■□□□ 1.19
CCM2-203ENST00000461377 CAPN11Q9UMQ6 739 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 PCDHA2Q9Y5H9 948 aa22.5■■□□□ 1.19
CCM2-203ENST00000461377 PITPNM2Q9BZ72 1349 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 FRMD3A2A2Y4 597 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 RRP9O43818 475 aaKnown RBP22.49■■□□□ 1.19
CCM2-203ENST00000461377 NCBP1Q09161 790 aaKnown RBP22.49■■□□□ 1.19
CCM2-203ENST00000461377 LRRC41Q15345 812 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 KIF4BQ2VIQ3 1234 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 CYP26C1Q6V0L0 522 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 LRRC55Q6ZSA7 311 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 FEZ1Q99689 392 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 WDR18Q9BV38 432 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 EHMT1Q9H9B1 1298 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 GINM1Q9NU53 330 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 TBC1D8BQ0IIM8 1120 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 ZCWPW2Q504Y3 356 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 ARSHQ5FYA8 562 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 MTERF4Q7Z6M4 381 aaKnown RBP22.49■■□□□ 1.19
CCM2-203ENST00000461377 MAP7D2Q96T17 732 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 DNAJC7Q99615 494 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 TSG101Q99816 390 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 POLR3CQ9BUI4 534 aaPredicted RBP22.49■■□□□ 1.19
CCM2-203ENST00000461377 TTYH3Q9C0H2 523 aa22.49■■□□□ 1.19
CCM2-203ENST00000461377 ZNF215Q9UL58 517 aaPredicted RBP22.49■■□□□ 1.19
CCM2-203ENST00000461377 ATAD5Q96QE3 1844 aa22.48■■□□□ 1.19
CCM2-203ENST00000461377 NPHP3-ACAD11A0A0J9YXS1 232 aa22.48■■□□□ 1.19
CCM2-203ENST00000461377 SLU7O95391 586 aaKnown RBP22.48■■□□□ 1.19
CCM2-203ENST00000461377 GMPSP49915 693 aaPredicted RBP22.48■■□□□ 1.19
CCM2-203ENST00000461377 RETREG2Q8NC44 543 aa22.48■■□□□ 1.19
CCM2-203ENST00000461377 ERGIC2Q96RQ1 377 aa22.48■■□□□ 1.19
CCM2-203ENST00000461377 NUP58Q9BVL2 599 aa22.48■■□□□ 1.19
CCM2-203ENST00000461377 PPP1R1BQ9UD71 204 aaPredicted RBP22.48■■□□□ 1.19
CCM2-203ENST00000461377 DNM3Q9UQ16 869 aa22.48■■□□□ 1.19
CCM2-203ENST00000461377 LUC7L2Q9Y383 392 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms