RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 HAS1Q92839 578 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 PLIN2Q99541 437 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 KCNMB3Q9NPA1 279 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 BLOC1S4Q9NUP1 217 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 MYH7BA7E2Y1 1941 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 PHF20L1A8MW92 1017 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L15C9J2P7 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L13C9JLJ4 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L11C9JVI0 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L18D6R9N7 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L22D6RA61 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L17D6RBQ6 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L19D6RCP7 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L20D6RJB6 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 PSMA7O14818 248 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 GTF2F1P35269 517 aaKnown RBP eCLIP18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L24Q0WX57 530 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 PPIL2Q13356 520 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 FILIP1LQ4L180 1135 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 NOL9Q5SY16 702 aaKnown RBP18.92■□□□□ 0.62
YIPF3-205ENST00000460547 HYIQ5T013 277 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 E4F1Q66K89 784 aaPredicted RBP18.92■□□□□ 0.62
YIPF3-205ENST00000460547 USP17L6PQ6QN14 398 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 DHTKD1Q96HY7 919 aaPredicted RBP18.92■□□□□ 0.62
YIPF3-205ENST00000460547 C16orf45Q96MC5 204 aaPredicted RBP18.92■□□□□ 0.62
YIPF3-205ENST00000460547 SH2D4AQ9H788 454 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 EXOC1Q9NV70 894 aa18.92■□□□□ 0.62
YIPF3-205ENST00000460547 ITIH6Q6UXX5 1313 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 CCL15-CCL14A0A0B4J2E2 113 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 TESPA1A2RU30 521 aaPredicted RBP18.91■□□□□ 0.62
YIPF3-205ENST00000460547 KIF2AO00139 706 aaPredicted RBP18.91■□□□□ 0.62
YIPF3-205ENST00000460547 PIK3CDO00329 1044 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 IRF6O14896 467 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
YIPF3-205ENST00000460547 STAT2P52630 851 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 IKQ13123 557 aaPredicted RBP18.91■□□□□ 0.62
YIPF3-205ENST00000460547 SNAPC2Q13487 334 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 CCL15Q16663 113 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 SV2BQ7L1I2 683 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 SCYL3Q8IZE3 742 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 ANKRD20A12PQ8NF67 263 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 SNX29Q8TEQ0 813 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 NOC3LQ8WTT2 800 aaKnown RBP18.91■□□□□ 0.62
YIPF3-205ENST00000460547 CDK5RAP3Q96JB5 506 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 MS4A4AQ96JQ5 239 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 LRRC27Q9C0I9 530 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 PRR12Q9ULL5 1215 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 KDM3AQ9Y4C1 1321 aa18.91■□□□□ 0.62
YIPF3-205ENST00000460547 PVALEFA0A1B0GWK0 134 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 POTEMA6NI47 508 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 USP27XA6NNY8 438 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 TBX3O15119 743 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 CCP110O43303 1012 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 CETPP11597 493 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 TNNT1P13805 278 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 SREBF1P36956 1147 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 ASIC1P78348 528 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 TMEM139Q8IV31 216 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 LARP4BQ92615 738 aaKnown RBP18.9■□□□□ 0.62
YIPF3-205ENST00000460547 RAD54LQ92698 747 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 THAP9Q9H5L6 903 aa18.9■□□□□ 0.62
YIPF3-205ENST00000460547 IGF2BP3O00425 579 aaKnown RBP eCLIP18.89■□□□□ 0.61
YIPF3-205ENST00000460547 DYNC1I1O14576 645 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 CAP2P40123 477 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 ARHGAP4P98171 946 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 KRT31Q15323 416 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 TCP11X2Q5H9J9 407 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 SLFN12Q8IYM2 578 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 TC2NQ8N9U0 490 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 ACER1Q8TDN7 264 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 VCPKMTQ9H867 229 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 ARHGAP6O43182 974 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 CIITAP33076 1130 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 Q4G0T1 1027 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 TTI2Q6NXR4 508 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 PTPN18Q99952 460 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 NT5C3AQ9H0P0 336 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 PCDHA12Q9UN75 941 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 PAXBP1Q9Y5B6 917 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 ZHX2Q9Y6X8 837 aa18.89■□□□□ 0.61
YIPF3-205ENST00000460547 BICDL2A1A5D9 508 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 KCNJ18B7U540 433 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 OPLAHO14841 1288 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 TEX33O43247 280 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 STX10O60499 249 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 TUBB4AP04350 444 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 EEF1GP26641 437 aaKnown RBP18.88■□□□□ 0.61
YIPF3-205ENST00000460547 PDE4DQ08499 809 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 KCNJ12Q14500 433 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 PTPN14Q15678 1187 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 KIAA1755Q5JYT7 1200 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 UNC13DQ70J99 1090 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 FAM160B2Q86V87 743 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 CHURC1Q8WUH1 139 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 BRI3BPQ8WY22 251 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 PANX2Q96RD6 677 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 P2RX7Q99572 595 aaKnown RBP18.88■□□□□ 0.61
YIPF3-205ENST00000460547 CFHR5Q9BXR6 569 aa18.88■□□□□ 0.61
YIPF3-205ENST00000460547 RANBP17Q9H2T7 1088 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms