RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TXKP42681 527 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 ZNF165P49910 485 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 USP11P51784 963 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 FCHSD1Q86WN1 690 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 AGBL1Q96MI9 1066 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 PYM1Q9BRP8 204 aaKnown RBP11.6□□□□□ -0.55
HERC4-207ENST00000460168 SUN2Q9UH99 717 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 AFG3L2Q9Y4W6 797 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 SNCAIPQ9Y6H5 919 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 SYNRGQ9UMZ2 1314 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 A0A087WWV3 80 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 GCOM1H8Y6P7 765 aaPredicted RBP11.6□□□□□ -0.55
HERC4-207ENST00000460168 BIN1O00499 593 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
HERC4-207ENST00000460168 EDIL3O43854 480 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 CAVIN2O95810 425 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 POLR2MP0CAP2 368 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 CYP2C19P33261 490 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 POSTNQ15063 836 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 TMEM266Q2M3C6 531 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 ELOA2Q8IYF1 753 aaPredicted RBP11.6□□□□□ -0.55
HERC4-207ENST00000460168 IQUBQ8NA54 791 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 RBM46Q8TBY0 533 aaKnown RBP11.6□□□□□ -0.55
HERC4-207ENST00000460168 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 AK8Q96MA6 479 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 SLC38A10Q9HBR0 1119 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 IRAK4Q9NWZ3 460 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 DDX41Q9UJV9 622 aaKnown RBP11.6□□□□□ -0.55
HERC4-207ENST00000460168 ZNF536O15090 1300 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 OTOFQ9HC10 1997 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 PP2D1A8MPX8 630 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 FOXN1O15353 648 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 ZBED4O75132 1171 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 ALAS1P13196 640 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 MTMR9Q96QG7 549 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 P2RX7Q99572 595 aaKnown RBP11.59□□□□□ -0.55
HERC4-207ENST00000460168 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 RAVER2Q9HCJ3 691 aaKnown RBP11.59□□□□□ -0.55
HERC4-207ENST00000460168 HOMER2Q9NSB8 354 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 POTECB2RU33 542 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 FDX1P10109 184 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 MAP2K2P36507 400 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 SREBF1P36956 1147 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 AFMP43652 599 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
HERC4-207ENST00000460168 GYS2P54840 703 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 ADCY2Q08462 1091 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 KARSQ15046 597 aaKnown RBP11.59□□□□□ -0.55
HERC4-207ENST00000460168 GRAMD1CQ8IYS0 662 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 ANKRD13AQ8IZ07 590 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 CACTIN-AS1Q8N1I8 211 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 TBC1D5Q92609 795 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 ATG4CQ96DT6 458 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 NAT10Q9H0A0 1025 aaKnown RBP11.59□□□□□ -0.55
HERC4-207ENST00000460168 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 CHCHD3Q9NX63 227 aaKnown RBP11.59□□□□□ -0.55
HERC4-207ENST00000460168 CCDC39Q9UFE4 941 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 USP25Q9UHP3 1055 aa11.59□□□□□ -0.55
HERC4-207ENST00000460168 VWA5AO00534 786 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 STAT6P42226 847 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 NOLC1Q14978 699 aaKnown RBP eCLIP11.58□□□□□ -0.56
HERC4-207ENST00000460168 PUS10Q3MIT2 529 aaKnown RBP11.58□□□□□ -0.56
HERC4-207ENST00000460168 ISM2Q6H9L7 571 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
HERC4-207ENST00000460168 LUZP1Q86V48 1076 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 PDLIM2Q96JY6 352 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 SLX1AQ9BQ83 275 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
HERC4-207ENST00000460168 EHMT1Q9H9B1 1298 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 CBX8Q9HC52 389 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 DISC1Q9NRI5 854 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 PCDHA5Q9Y5H7 936 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 WDR90Q96KV7 1748 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 ZNF76P36508 570 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
HERC4-207ENST00000460168 COG2Q14746 738 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 E2F4Q16254 413 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 DPCR1Q3MIW9 517 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 PRR16Q569H4 304 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 MOXD1Q6UVY6 613 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 MOB2Q70IA6 237 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 TRIM74Q86UV6 250 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 TRIM73Q86UV7 250 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 CABP7Q86V35 215 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 IGSF22Q8N9C0 903 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 ANKRD20A12PQ8NF67 263 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 CRYGNQ8WXF5 182 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 OTUD5Q96G74 571 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 CEP89Q96ST8 783 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 LRWD1Q9UFC0 647 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 PNMA2Q9UL42 364 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.56
HERC4-207ENST00000460168 PAPPA2Q9BXP8 1791 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 PARP14Q460N5 1801 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms