RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 ITGB8P26012 769 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 ICAM3P32942 547 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-217ENST00000455069 CPT1AP50416 773 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 NEK4P51957 841 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 ME3Q16798 604 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 PPP1R13LQ8WUF5 828 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 AFG1LQ8WV93 481 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 EMID1Q96A84 441 aaPredicted RBP12.97□□□□□ -0.33
HDAC9-217ENST00000455069 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 AIFM3Q96NN9 605 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 ZMYND12Q9H0C1 365 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
HDAC9-217ENST00000455069 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 ARVCFO00192 962 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 ZEB2O60315 1214 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 STAM2O75886 525 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 GGPS1O95749 300 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 MYL3P08590 195 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 ITGB5P18084 799 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 RBM25P49756 843 aaKnown RBP12.96□□□□□ -0.33
HDAC9-217ENST00000455069 FAAP100Q0VG06 881 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 ITGA7Q13683 1181 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 MYSM1Q5VVJ2 828 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 FAM126BQ8IXS8 530 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
HDAC9-217ENST00000455069 ANO3Q9BYT9 981 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
HDAC9-217ENST00000455069 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 UBIAD1Q9Y5Z9 338 aa12.96□□□□□ -0.33
HDAC9-217ENST00000455069 WDR81Q562E7 1941 aa12.96□□□□□ -0.34
HDAC9-217ENST00000455069 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 FIBPO43427 364 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 CABYRO75952 493 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 CLTBP09497 229 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 HOXD8P13378 290 aaPredicted RBP12.95□□□□□ -0.34
HDAC9-217ENST00000455069 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
HDAC9-217ENST00000455069 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 ANKRD1Q15327 319 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 NPY5RQ15761 445 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 HSDL1Q3SXM5 330 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 GNPTABQ3T906 1256 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 CELF3Q5SZQ8 465 aaKnown RBP12.95□□□□□ -0.34
HDAC9-217ENST00000455069 JAKMIP3Q5VZ66 844 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 XRRA1Q6P2D8 792 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
HDAC9-217ENST00000455069 NECAB1Q8N987 351 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 PPTC7Q8NI37 304 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 RASGRP4Q8TDF6 673 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 CRYGNQ8WXF5 182 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 KAT2BQ92831 832 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 VTI1AQ96AJ9 217 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 TOX2Q96NM4 488 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 PRDM5Q9NQX1 630 aaPredicted RBP12.95□□□□□ -0.34
HDAC9-217ENST00000455069 POLR3EQ9NVU0 708 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 GTF3C3Q9Y5Q9 886 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 CUL9Q8IWT3 2517 aa12.95□□□□□ -0.34
HDAC9-217ENST00000455069 CPLX1O14810 134 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 EDIL3O43854 480 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 ATP9AO75110 1047 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 DEXIO95424 95 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 CD4P01730 458 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 TGFB3P10600 412 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 KCNA2P16389 499 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 SREBF1P36956 1147 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
HDAC9-217ENST00000455069 AKAP17AQ02040 695 aaKnown RBP12.94□□□□□ -0.34
HDAC9-217ENST00000455069 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 TEX2Q8IWB9 1127 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 TRIM22Q8IYM9 498 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 GPRASP2Q96D09 838 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 MTG1Q9BT17 334 aaPredicted RBP12.94□□□□□ -0.34
HDAC9-217ENST00000455069 TBX21Q9UL17 535 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 SCN5AQ14524 2016 aa12.94□□□□□ -0.34
HDAC9-217ENST00000455069 MROH7Q68CQ1 1323 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 KIAA0355O15063 1070 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 B4GALT4O60513 344 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 FOSP01100 380 aaPredicted RBP12.93□□□□□ -0.34
HDAC9-217ENST00000455069 ZNF286BP0CG31 522 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
HDAC9-217ENST00000455069 LAMC2Q13753 1193 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 TDHQ8IZJ6 230 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 REXO1Q8N1G1 1221 aaKnown RBP12.93□□□□□ -0.34
HDAC9-217ENST00000455069 CCDC12Q8WUD4 166 aaPredicted RBP12.93□□□□□ -0.34
HDAC9-217ENST00000455069 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 GLT8D2Q9H1C3 349 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 C6orf50Q9HD87 102 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 JADE2Q9NQC1 790 aa12.93□□□□□ -0.34
HDAC9-217ENST00000455069 SH3GLB2Q9NR46 395 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms