RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 WDR93Q6P2C0 686 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 TMEM179Q6ZVK1 233 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 CCDC65Q8IXS2 484 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 PNKPQ96T60 521 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 ST7Q9NRC1 585 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 FAM198AQ9UFP1 575 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 SAR1BQ9Y6B6 198 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 FRMD3A2A2Y4 597 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 PLSCR1O15162 318 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 MARCH6O60337 910 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 SLC1A4P43007 532 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 ATP2B2Q01814 1243 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 SPA17Q15506 151 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 CDC37Q16543 378 aaPredicted RBP23.52■■□□□ 1.36
PUF60-203ENST00000453551 ZFPM1Q8IX07 1006 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 GMCL1Q96IK5 515 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 CCDC42Q96M95 316 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 PITPNM2Q9BZ72 1349 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 PANK4Q9NVE7 773 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 PCDHA2Q9Y5H9 948 aa23.52■■□□□ 1.36
PUF60-203ENST00000453551 NKRFO15226 690 aaKnown RBP eCLIP23.51■■□□□ 1.356e-7■□□□□ 9.7
PUF60-203ENST00000453551 HSPA1LP34931 641 aa23.51■■□□□ 1.35
PUF60-203ENST00000453551 KIF5AQ12840 1032 aa23.51■■□□□ 1.35
PUF60-203ENST00000453551 STYK1Q6J9G0 422 aa23.51■■□□□ 1.35
PUF60-203ENST00000453551 ZNF771Q7L3S4 317 aaPredicted RBP23.51■■□□□ 1.35
PUF60-203ENST00000453551 LACRTQ9GZZ8 138 aa23.51■■□□□ 1.35
PUF60-203ENST00000453551 PCDHA1Q9Y5I3 950 aa23.51■■□□□ 1.35
PUF60-203ENST00000453551 COL4A3BPQ9Y5P4 624 aa23.51■■□□□ 1.35
PUF60-203ENST00000453551 ATRNL1Q5VV63 1379 aa23.5■■□□□ 1.35
PUF60-203ENST00000453551 RCCD1A6NED2 376 aa23.5■■□□□ 1.35
PUF60-203ENST00000453551 SMC1AQ14683 1233 aaKnown RBP23.5■■□□□ 1.35
PUF60-203ENST00000453551 HDXQ7Z353 690 aa23.5■■□□□ 1.35
PUF60-203ENST00000453551 BAP1Q92560 729 aa23.5■■□□□ 1.35
PUF60-203ENST00000453551 NUCKS1Q9H1E3 243 aaKnown RBP23.5■■□□□ 1.35
PUF60-203ENST00000453551 SERPINA10Q9UK55 444 aa23.5■■□□□ 1.35
PUF60-203ENST00000453551 FOSP01100 380 aaPredicted RBP23.49■■□□□ 1.35
PUF60-203ENST00000453551 ATP1A1P05023 1023 aaKnown RBP23.49■■□□□ 1.35
PUF60-203ENST00000453551 PLA2G4BP0C869 781 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 MAPK8IP2Q13387 824 aaPredicted RBP23.49■■□□□ 1.35
PUF60-203ENST00000453551 Q4G0T1 1027 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 PDXDC1Q6P996 788 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 SH3BP5LQ7L8J4 393 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 SIAH1Q8IUQ4 282 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 SYN2Q92777 582 aaPredicted RBP23.49■■□□□ 1.35
PUF60-203ENST00000453551 EEF2KMTQ96G04 330 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 ARHGAP20Q9P2F6 1191 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 L1RE1Q9UN81 338 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 SSU72P8A0A1W2PR75 194 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 DDTLA6NHG4 134 aaPredicted RBP23.49■■□□□ 1.35
PUF60-203ENST00000453551 MEIS2O14770 477 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 ZNF263O14978 683 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 USO1O60763 962 aaKnown RBP23.49■■□□□ 1.35
PUF60-203ENST00000453551 MCM3P25205 808 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 HAUS3Q68CZ6 603 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 PPP4R3CPQ6ZMV5 832 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 TXLNBQ8N3L3 684 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 AMNQ9BXJ7 453 aa23.49■■□□□ 1.35
PUF60-203ENST00000453551 TARSL2A2RTX5 802 aaKnown RBP23.48■■□□□ 1.35
PUF60-203ENST00000453551 PJA2O43164 708 aa23.48■■□□□ 1.35
PUF60-203ENST00000453551 USP14P54578 494 aa23.48■■□□□ 1.35
PUF60-203ENST00000453551 NCAPH2Q6IBW4 605 aa23.48■■□□□ 1.35
PUF60-203ENST00000453551 BTNL9Q6UXG8 535 aa23.48■■□□□ 1.35
PUF60-203ENST00000453551 KCTD17Q8N5Z5 321 aa23.48■■□□□ 1.35
PUF60-203ENST00000453551 TRIM58Q8NG06 486 aa23.48■■□□□ 1.35
PUF60-203ENST00000453551 ETNPPLQ8TBG4 499 aa23.48■■□□□ 1.35
PUF60-203ENST00000453551 SECISBP2LQ93073 1101 aaKnown RBP23.48■■□□□ 1.35
PUF60-203ENST00000453551 USP17L15C9J2P7 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L13C9JLJ4 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L11C9JVI0 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L18D6R9N7 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L22D6RA61 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L17D6RBQ6 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L19D6RCP7 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L20D6RJB6 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 EPHB6O15197 1021 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 ENTPD3O75355 529 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 MMP10P09238 476 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 PRLRP16471 622 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 CYP11B2P19099 503 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 KIF11P52732 1056 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L24Q0WX57 530 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 USP17L6PQ6QN14 398 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 NOA1Q8NC60 698 aaKnown RBP23.47■■□□□ 1.35
PUF60-203ENST00000453551 NEK11Q8NG66 645 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 SH2D4AQ9H788 454 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 ATAD5Q96QE3 1844 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 OAS2P29728 719 aaKnown RBP23.47■■□□□ 1.35
PUF60-203ENST00000453551 CIITAP33076 1130 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 ARHGAP4P98171 946 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 ICA1Q05084 483 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 SPIRE1Q08AE8 756 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 LRRC41Q15345 812 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 EDRF1Q3B7T1 1238 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 ZNF572Q7Z3I7 529 aaPredicted RBP23.47■■□□□ 1.35
PUF60-203ENST00000453551 GLIS3Q8NEA6 775 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 MMRN2Q9H8L6 949 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 DBNDD1Q9H9R9 158 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 KIAA1024Q9UPX6 916 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 PCDHA13Q9Y5I0 950 aa23.47■■□□□ 1.35
PUF60-203ENST00000453551 TFRCP02786 760 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms