RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 CYP4F3Q08477 520 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 PPP2R5EQ16537 467 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 INF2Q27J81 1249 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 USP51Q70EK9 711 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 TEX2Q8IWB9 1127 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 CPLX3Q8WVH0 158 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 TRMT2BQ96GJ1 504 aaKnown RBP3.99□□□□□ -1.77
LRCH3-209ENST00000452660 TMEM169Q96HH4 297 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 YIPF4Q9BSR8 244 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 EPN3Q9H201 632 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 L2HGDHQ9H9P8 463 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 GPRC5CQ9NQ84 441 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 PPP4R1LQ9P1A2 415 aa3.99□□□□□ -1.77
LRCH3-209ENST00000452660 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.99□□□□□ -1.77
LRCH3-209ENST00000452660 NPEPPSL1A6NEC2 478 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 PATE3B3GLJ2 98 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 MEFVO15553 781 aaPredicted RBP3.98□□□□□ -1.77
LRCH3-209ENST00000452660 FZD7O75084 574 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 C6P13671 934 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 IL13P35225 146 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 NASPP49321 788 aaPredicted RBP3.98□□□□□ -1.77
LRCH3-209ENST00000452660 SELENOPP49908 381 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 LSAMPQ13449 338 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 CDSNQ15517 529 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 TMCO4Q5TGY1 634 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 PRAMEF18Q5VWM3 479 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 CEP68Q76N32 757 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 CIR1Q86X95 450 aaPredicted RBP3.98□□□□□ -1.77
LRCH3-209ENST00000452660 TRIM48Q8IWZ4 208 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 FAM26EQ8N5C1 309 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 KREMEN2Q8NCW0 462 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 TGIF2Q9GZN2 237 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 KLC2Q9H0B6 622 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 SMOC1Q9H4F8 434 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 EPB41L1Q9H4G0 881 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 SEC61A2Q9H9S3 476 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 BARX1Q9HBU1 254 aaPredicted RBP3.98□□□□□ -1.77
LRCH3-209ENST00000452660 NPFFR2Q9Y5X5 522 aa3.98□□□□□ -1.77
LRCH3-209ENST00000452660 TCRBV5S2A0A599 114 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 CAPNS1P04632 268 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 CYP1A1P04798 512 aaPredicted RBP3.97□□□□□ -1.77
LRCH3-209ENST00000452660 TNNI3KQ59H18 835 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 STEAP3Q658P3 488 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 TEPPQ6URK8 271 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 ARHGEF18Q6ZSZ5 1173 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 NLRP10Q86W26 655 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 FAM169BQ8N8A8 192 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 MSL2Q9HCI7 577 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 FTSJ1Q9UET6 329 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 ADAM29Q9UKF5 820 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 NUB1Q9Y5A7 615 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 PCDHB4Q9Y5E5 795 aa3.97□□□□□ -1.77
LRCH3-209ENST00000452660 GPR42O15529 346 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 DGKIO75912 1065 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 FSHBP01225 129 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 FPR2P25090 351 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 BCL6P41182 706 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 GFRA1P56159 465 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 NFATC3Q12968 1075 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 RSPO2Q6UXX9 243 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-209ENST00000452660 NT5DC4Q86YG4 428 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 CCDC103Q8IW40 242 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 SH3RF3Q8TEJ3 882 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-209ENST00000452660 TCAF1Q9Y4C2 921 aa3.96□□□□□ -1.78
LRCH3-209ENST00000452660 KRIT1O00522 736 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 LRG1P02750 347 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 STAT5AP42229 794 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 HMGA2P52926 109 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 MAP4K2Q12851 820 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 ICAM4Q14773 271 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 R3HDM1Q15032 1099 aaKnown RBP3.95□□□□□ -1.78
LRCH3-209ENST00000452660 LIMS2Q7Z4I7 341 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 ZNF227Q86WZ6 799 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 REXO1L1PQ8IX06 675 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 KBTBD2Q8IY47 623 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 Q8N1X5 172 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 RCBTB1Q8NDN9 531 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.95□□□□□ -1.78
LRCH3-209ENST00000452660 ZNF747Q9BV97 191 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 SLITRK6Q9H5Y7 841 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 DLL4Q9NR61 685 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 ST6GALNAC2Q9UJ37 374 aa3.95□□□□□ -1.78
LRCH3-209ENST00000452660 ARNTLO00327 626 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 MUSKO15146 869 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 SUSD5O60279 629 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 ITGAVP06756 1048 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 SNRPB2P08579 225 aaKnown RBP3.94□□□□□ -1.78
LRCH3-209ENST00000452660 MLLT6P55198 1093 aaPredicted RBP3.94□□□□□ -1.78
LRCH3-209ENST00000452660 HDLBPQ00341 1268 aaKnown RBP3.94□□□□□ -1.78
LRCH3-209ENST00000452660 HS1BP3Q53T59 392 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 SLC35F1Q5T1Q4 408 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 SPRED1Q7Z699 444 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 PPIL6Q8IXY8 311 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 ARRDC4Q8NCT1 418 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 IGDCC4Q8TDY8 1250 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 BTN2A2Q8WVV5 523 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 ZCCHC14Q8WYQ9 949 aaKnown RBP3.94□□□□□ -1.78
LRCH3-209ENST00000452660 AJUBAQ96IF1 538 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 SYT3Q9BQG1 590 aa3.94□□□□□ -1.78
LRCH3-209ENST00000452660 SLC6A20Q9NP91 592 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms