RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 KLHL30Q0D2K2 578 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 KIAA0753Q2KHM9 967 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
DDR1-239ENST00000452441 PANK4Q9NVE7 773 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 NUP98P52948 1817 aa12.33□□□□□ -0.43
DDR1-239ENST00000452441 APTXQ7Z2E3 356 aaKnown RBP12.33□□□□□ -0.44
DDR1-239ENST00000452441 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
DDR1-239ENST00000452441 GRM4Q14833 912 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
DDR1-239ENST00000452441 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 C8orf74Q6P047 294 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 CTNNBL1Q8WYA6 563 aaPredicted RBP12.33□□□□□ -0.44
DDR1-239ENST00000452441 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 RXRBP28702 533 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 ADAM9Q13443 819 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 MTRQ99707 1265 aa12.33□□□□□ -0.44
DDR1-239ENST00000452441 CHORDC1Q9UHD1 332 aaPredicted RBP12.33□□□□□ -0.44
DDR1-239ENST00000452441 POTEFA5A3E0 1075 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 LRRC53A6NM62 1247 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 ALAS1P13196 640 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 EZH2Q15910 746 aaKnown RBP12.32□□□□□ -0.44
DDR1-239ENST00000452441 FAM26FQ5R3K3 315 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 BEND6Q5SZJ8 279 aaPredicted RBP12.32□□□□□ -0.44
DDR1-239ENST00000452441 POTEGQ6S5H5 508 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 NDST4Q9H3R1 872 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 BARHL2Q9NY43 387 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.32□□□□□ -0.44
DDR1-239ENST00000452441 MYH3P11055 1940 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 GOLGA6L10A6NI86 522 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 KCNK3O14649 394 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
DDR1-239ENST00000452441 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
DDR1-239ENST00000452441 GUCY2DQ02846 1103 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 DDR1Q08345 913 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 CDKAL1Q5VV42 579 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 CCDC25Q86WR0 208 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 MYOCDQ8IZQ8 938 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 MICALL1Q8N3F8 863 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 ERMNQ8TAM6 284 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 LUC7LQ9NQ29 371 aaKnown RBP12.32□□□□□ -0.44
DDR1-239ENST00000452441 TRIM66O15016 1216 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 SLC37A4O43826 429 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 LRRN2O75325 713 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 NPR1P16066 1061 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 IFFO1Q0D2I5 559 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 MYCT1Q8N699 235 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
DDR1-239ENST00000452441 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 NKRFO15226 690 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDR1-239ENST00000452441 KRT13P13646 458 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 IQCEQ6IPM2 695 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
DDR1-239ENST00000452441 ADGRF4Q8IZF3 695 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 AP1M1Q9BXS5 423 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 EP400Q96L91 3159 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 MYMKA6NI61 221 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 BACH1O14867 736 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 ECE2O60344 883 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 FAM13AO94988 1023 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 ACTN1P12814 892 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 CCNE1P24864 410 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 KRT12Q99456 494 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 DPH5Q9H2P9 285 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 MAD2L2Q9UI95 211 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 KIF11P52732 1056 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 ANAPC4Q9UJX5 808 aa12.31□□□□□ -0.44
DDR1-239ENST00000452441 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 RNF40O75150 1001 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 NR2F2P24468 414 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 CKAP4Q07065 602 aaKnown RBP12.3□□□□□ -0.44
DDR1-239ENST00000452441 CTTNQ14247 550 aaKnown RBP12.3□□□□□ -0.44
DDR1-239ENST00000452441 CDC37Q16543 378 aaPredicted RBP12.3□□□□□ -0.44
DDR1-239ENST00000452441 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 CDC42EP5Q6NZY7 148 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 CCDC65Q8IXS2 484 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 UBLCP1Q8WVY7 318 aaPredicted RBP12.3□□□□□ -0.44
DDR1-239ENST00000452441 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 UBXN6Q9BZV1 441 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 PCIF1Q9H4Z3 704 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 HSF2BPO75031 334 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 PBX1P40424 430 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 MRRFQ96E11 262 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms