RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TRIM21P19474 475 aaKnown RBP9.46□□□□□ -0.9
LSM5-208ENST00000450169 NCALDP61601 193 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 LACTBP83111 547 aaPredicted RBP9.46□□□□□ -0.9
LSM5-208ENST00000450169 ATP11AP98196 1134 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 HLTFQ14527 1009 aaKnown RBP eCLIP9.46□□□□□ -0.9
LSM5-208ENST00000450169 TRADDQ15628 312 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 UAP1Q16222 522 aaPredicted RBP9.46□□□□□ -0.9
LSM5-208ENST00000450169 KIAA0753Q2KHM9 967 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 EPHA10Q5JZY3 1008 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 MYLK4Q86YV6 388 aaPredicted RBP9.46□□□□□ -0.9
LSM5-208ENST00000450169 NELFBQ8WX92 580 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 LRRC45Q96CN5 670 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 CCDC42Q96M95 316 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 ZNF317Q96PQ6 595 aaPredicted RBP9.46□□□□□ -0.9
LSM5-208ENST00000450169 PCMTD2Q9NV79 361 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 PAG1Q9NWQ8 432 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 ADAM22Q9P0K1 906 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 VPS54Q9P1Q0 977 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 SAMD15Q9P1V8 674 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 ACEP12821 1306 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 FLT4P35916 1363 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 DCDC2CA8MYV0 355 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 BTBD18B2RXH4 712 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 CREB3O43889 395 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 PARP1P09874 1014 aaKnown RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 RARAP10276 462 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 KCNA6P17658 529 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 RXRAP19793 462 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 IARSP41252 1262 aaKnown RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 SAFBQ15424 915 aaKnown RBP eCLIP9.45□□□□□ -0.9
LSM5-208ENST00000450169 KRT26Q7Z3Y9 468 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 PIGWQ7Z7B1 504 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 CENPTQ96BT3 561 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 KRT12Q99456 494 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 SYT15Q9BQS2 421 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 TLR10Q9BXR5 811 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 ECT2Q9H8V3 914 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 PCDHB6Q9Y5E3 794 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 WDR19Q8NEZ3 1342 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 USP31Q70CQ4 1352 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 ECM29Q5VYK3 1845 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 MYL1P05976 194 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 KRT16P08779 473 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 PCK1P35558 622 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 MSH2P43246 934 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 GNAQP50148 359 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 SCNN1BP51168 640 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 ZNF131P52739 623 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 POLE2P56282 527 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 ZBED6P86452 979 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 SF3A3Q12874 501 aaKnown RBP eCLIP9.45□□□□□ -0.91e-7■■■■□ 19.8
LSM5-208ENST00000450169 DIS3L2Q8IYB7 885 aaKnown RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 EIF1ADQ8N9N8 165 aaKnown RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 KLHL29Q96CT2 875 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 EPSTI1Q96J88 318 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 UBE2OQ9C0C9 1292 aaKnown RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 TTYH3Q9C0H2 523 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 MMADHCQ9H3L0 296 aaPredicted RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 ABCF3Q9NUQ8 709 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 STK38LQ9Y2H1 464 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 PCDHA13Q9Y5I0 950 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 PDS5AQ29RF7 1337 aaKnown RBP9.45□□□□□ -0.9
LSM5-208ENST00000450169 USP6P35125 1406 aa9.45□□□□□ -0.9
LSM5-208ENST00000450169 M0R2C6 588 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 FLOT1O75955 427 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 UBOX5O94941 541 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 OATP04181 439 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 PDHA1P08559 390 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 CDK17Q00537 523 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 ACBD5Q5T8D3 534 aaPredicted RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 APBB1IPQ7Z5R6 666 aaPredicted RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 MDM1Q8TC05 714 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 MAIP1Q8WWC4 291 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 ISCUQ9H1K1 167 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 COPRSQ9NQ92 184 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 AATFQ9NY61 560 aaKnown RBP eCLIP9.44□□□□□ -0.9
LSM5-208ENST00000450169 ANGEL1Q9UNK9 670 aaKnown RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 LRRC42Q9Y546 428 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 A0A0G2JS52 829 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 H7C1D1 291 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 RNF113AO15541 343 aaKnown RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 RANBP6O60518 1105 aaKnown RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 HIP1RO75146 1068 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 MMP1P03956 469 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 MMEP08473 750 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 NDUFV2P19404 249 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 ATP6V1C1P21283 382 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 DNM2P50570 870 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 MTMR3Q13615 1198 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 TMEM154Q6P9G4 183 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 APOA5Q6Q788 366 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 MICU3Q86XE3 530 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 IRF2BP1Q8IU81 584 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 FBF1Q8TES7 1133 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 UBLCP1Q8WVY7 318 aaPredicted RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 KIFAP3Q92845 792 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms