RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 CABYRO75952 493 aa28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 ACRP10323 421 aa28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 PBX2P40425 430 aa28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 EVCP57679 992 aa28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 LY6KQ17RY6 165 aa28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 ZNF365Q70YC5 407 aa28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 VSIG10LQ86VR7 867 aa28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 MTIF3Q9H2K0 278 aaKnown RBP28.78■■■□□ 2.2
HTATSF1-203ENST00000448450 GRXCR1A8MXD5 290 aa28.77■■■□□ 2.2
HTATSF1-203ENST00000448450 CD4P01730 458 aa28.77■■■□□ 2.2
HTATSF1-203ENST00000448450 CCND2P30279 289 aa28.77■■■□□ 2.2
HTATSF1-203ENST00000448450 NAPAP54920 295 aa28.77■■■□□ 2.2
HTATSF1-203ENST00000448450 UBE2SQ16763 222 aa28.77■■■□□ 2.2
HTATSF1-203ENST00000448450 CXCL17Q6UXB2 119 aa28.77■■■□□ 2.2
HTATSF1-203ENST00000448450 KIAA1217Q5T5P2 1943 aa28.77■■■□□ 2.2
HTATSF1-203ENST00000448450 PIK3CDO00329 1044 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 NKRFO15226 690 aaKnown RBP eCLIP28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 ZEB2O60315 1214 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 CYP2C18P33260 490 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 STK3Q13188 491 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 C8orf34Q49A92 452 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 TYW1BQ6NUM6 668 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 CCDC62Q6P9F0 684 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 PHKBQ93100 1093 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 IL23AQ9NPF7 189 aa28.76■■■□□ 2.19
HTATSF1-203ENST00000448450 CHD7Q9P2D1 2997 aa28.75■■■□□ 2.19
HTATSF1-203ENST00000448450 STXBP3O00186 592 aa28.75■■■□□ 2.19
HTATSF1-203ENST00000448450 RAB30Q15771 203 aa28.75■■■□□ 2.19
HTATSF1-203ENST00000448450 HIPK3Q9H422 1215 aa28.75■■■□□ 2.19
HTATSF1-203ENST00000448450 MSRAQ9UJ68 235 aa28.75■■■□□ 2.19
HTATSF1-203ENST00000448450 MRVI1Q9Y6F6 885 aa28.75■■■□□ 2.19
HTATSF1-203ENST00000448450 NID2Q14112 1375 aa28.75■■■□□ 2.19
HTATSF1-203ENST00000448450 GBF1Q92538 1859 aa28.74■■■□□ 2.19
HTATSF1-203ENST00000448450 NTRK3Q16288 839 aa28.74■■■□□ 2.19
HTATSF1-203ENST00000448450 SLC43A3Q8NBI5 491 aa28.74■■■□□ 2.19
HTATSF1-203ENST00000448450 ZNF274Q96GC6 653 aaPredicted RBP28.74■■■□□ 2.19
HTATSF1-203ENST00000448450 SEZ6LQ9BYH1 1024 aa28.74■■■□□ 2.19
HTATSF1-203ENST00000448450 PRDM12Q9H4Q4 367 aa28.74■■■□□ 2.19
HTATSF1-203ENST00000448450 DDX41Q9UJV9 622 aaKnown RBP28.74■■■□□ 2.19
HTATSF1-203ENST00000448450 PRPF3O43395 683 aaKnown RBP28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 RGS20O76081 388 aa28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 MYL3P08590 195 aa28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 AKAP17AQ02040 695 aaKnown RBP28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 ITGA7Q13683 1181 aa28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 PFKFB3Q16875 520 aaPredicted RBP28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 HERVK_113Q902F9 699 aa28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 SLC26A6Q9BXS9 759 aa28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 BARHL2Q9NY43 387 aa28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 RTEL1Q9NZ71 1219 aa28.73■■■□□ 2.19
HTATSF1-203ENST00000448450 SMCO2A6NFE2 343 aa28.72■■■□□ 2.19
HTATSF1-203ENST00000448450 SORBS3O60504 671 aa28.72■■■□□ 2.19
HTATSF1-203ENST00000448450 SCG2P13521 617 aa28.72■■■□□ 2.19
HTATSF1-203ENST00000448450 CPT1AP50416 773 aa28.72■■■□□ 2.19
HTATSF1-203ENST00000448450 MRPS9P82933 396 aaKnown RBP28.72■■■□□ 2.19
HTATSF1-203ENST00000448450 PPM1EQ8WY54 764 aa28.72■■■□□ 2.19
HTATSF1-203ENST00000448450 FRMPD4Q14CM0 1322 aa28.71■■■□□ 2.19
HTATSF1-203ENST00000448450 GH1P01241 217 aa28.71■■■□□ 2.19
HTATSF1-203ENST00000448450 FGBP02675 491 aa28.71■■■□□ 2.19
HTATSF1-203ENST00000448450 PKN1Q16512 942 aa28.71■■■□□ 2.19
HTATSF1-203ENST00000448450 RIC8AQ9NPQ8 531 aa28.71■■■□□ 2.19
HTATSF1-203ENST00000448450 PCDHA6Q9UN73 950 aa28.71■■■□□ 2.19
HTATSF1-203ENST00000448450 PCDHA8Q9Y5H6 950 aa28.71■■■□□ 2.19
HTATSF1-203ENST00000448450 SPDYE3A6NKU9 549 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 hCG_1984214I3L0E3 225 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 IFNAR1P17181 557 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 ADCY7P51828 1080 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 PSMC6P62333 389 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 ARHGAP1Q07960 439 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 BRDTQ58F21 947 aaPredicted RBP28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 PPP1R18Q6NYC8 613 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 ZNF713Q8N859 430 aaPredicted RBP28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 AFG1LQ8WV93 481 aa28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 CXXC1Q9P0U4 656 aaPredicted RBP28.7■■■□□ 2.18
HTATSF1-203ENST00000448450 UMODL1Q5DID0 1318 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 MYH7BA7E2Y1 1941 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 CPLX1O14810 134 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 AK2P54819 239 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 ATXN2LQ8WWM7 1075 aaKnown RBP28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 ALDH8A1Q9H2A2 487 aaPredicted RBP28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 SLC28A3Q9HAS3 691 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 POLR3EQ9NVU0 708 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 THEGQ9P2T0 379 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 TPCN1Q9ULQ1 816 aa28.69■■■□□ 2.18
HTATSF1-203ENST00000448450 A6NJR5 290 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 TNFRSF10AO00220 468 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 NEK4P51957 841 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 PCNX4Q63HM2 1172 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 DHX37Q8IY37 1157 aaKnown RBP28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 IL17RAQ96F46 866 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 PGBD1Q96JS3 809 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 NOC4LQ9BVI4 516 aaKnown RBP28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 RNF26Q9BY78 433 aaPredicted RBP28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 TRPV6Q9H1D0 765 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 TMEM260Q9NX78 707 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 GRIN2DO15399 1336 aa28.68■■■□□ 2.18
HTATSF1-203ENST00000448450 B4GALT4O60513 344 aa28.67■■■□□ 2.18
HTATSF1-203ENST00000448450 CCL23P55773 120 aa28.67■■■□□ 2.18
HTATSF1-203ENST00000448450 PURAQ00577 322 aaKnown RBP28.67■■■□□ 2.18
HTATSF1-203ENST00000448450 SP2Q02086 613 aa28.67■■■□□ 2.18
HTATSF1-203ENST00000448450 SSRP1Q08945 709 aaKnown RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms