RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 SART1O43290 800 aaKnown RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 ARID4AP29374 1257 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 ECHS1P30084 290 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 CHADLQ6NUI6 762 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 GALNT15Q8N3T1 639 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 KIF2BQ8N4N8 673 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 MYH6P13533 1939 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 SPEF2Q9C093 1822 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 PCK1P35558 622 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 FLT3P36888 993 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 CASP7P55210 303 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 ATP2C1P98194 919 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 LMNTD2Q8IXW0 634 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 IP6K1Q92551 441 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 INPP4AQ96PE3 977 aaPredicted RBP10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 EPAS1Q99814 870 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 NEUROG2Q9H2A3 272 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 ARHGEF10LQ9HCE6 1279 aa10.33□□□□□ -0.76
SYNPO2-204ENST00000448416 hCG_1642624A0A1W2PR95 340 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 KRT16P08779 473 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 CCDC38Q502W7 563 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 IQCDQ96DY2 449 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 DUSP9Q99956 384 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 NSRP1Q9H0G5 558 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 RPS6KL1Q9Y6S9 549 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 DIP2AQ14689 1571 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 PRDM1O75626 825 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 RARAP10276 462 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 DHX9Q08211 1270 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 TRIM74Q86UV6 250 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 TRIM73Q86UV7 250 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 FANCBQ8NB91 859 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 ZCWPW1Q9H0M4 648 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 LRRC53A6NM62 1247 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 HIP1RO75146 1068 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 MYBP10242 640 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 MSH2P43246 934 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 MTHFD1LQ6UB35 978 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 CWC25Q9NXE8 425 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 CD2APQ9Y5K6 639 aa10.32□□□□□ -0.76
SYNPO2-204ENST00000448416 PIK3C2AO00443 1686 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 SPDYE5A6NIY4 337 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 EPHB6O15197 1021 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 IDH1O75874 414 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 PDHA1P08559 390 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ZNF790Q6PG37 636 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ARHGAP22Q7Z5H3 698 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 TRIM4Q9C037 500 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 LUC7LQ9NQ29 371 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 INTS9Q9NV88 658 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 CHCHD3Q9NX63 227 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ADAM22Q9P0K1 906 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 PXDNQ92626 1479 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 TLDC2A0PJX2 215 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 KCNK3O14649 394 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 MCM7P33993 719 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ADD2P35612 726 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ZNF131P52739 623 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 MRPS35P82673 323 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 MIIPQ5JXC2 388 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 PPP1R15BQ5SWA1 713 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 DHTKD1Q96HY7 919 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 PIDD1Q9HB75 910 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 G3BP2Q9UN86 482 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 C2CD2Q9Y426 696 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ABCC12Q96J65 1359 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 BICDL2A1A5D9 508 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 DAPK3O43293 454 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 RNF8O76064 485 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ANO7Q6IWH7 933 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 HOOK3Q86VS8 718 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ZFAND2BQ8WV99 257 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 P2RX5Q93086 422 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 TLCD1Q96CP7 247 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ANKRD27Q96NW4 1050 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 NAPBQ9H115 298 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 CNNM2Q9H8M5 875 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 ANKIB1Q9P2G1 1089 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 THRAP3Q9Y2W1 955 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 SLC4A4Q9Y6R1 1079 aa10.31□□□□□ -0.76
SYNPO2-204ENST00000448416 CEP104O60308 925 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 CNGA1P29973 690 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 IFNAR2P48551 515 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 CUL3Q13618 768 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 MEI1Q5TIA1 1274 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 ANKRD40Q6AI12 368 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 MFSD6Q6ZSS7 791 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 SPATA21Q7Z572 469 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 TMC3Q7Z5M5 1100 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 PRMT1Q99873 361 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 KRT23Q9C075 422 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 RAB17Q9H0T7 212 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 F8VZ95 297 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms