RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 LRIG3Q6UXM1 1119 aa17.62■□□□□ 0.41
CNOT3-204ENST00000447684 PARD3BQ8TEW8 1205 aa17.62■□□□□ 0.41
CNOT3-204ENST00000447684 KDM4CQ9H3R0 1056 aa17.62■□□□□ 0.41
CNOT3-204ENST00000447684 RBM28Q9NW13 759 aaKnown RBP17.62■□□□□ 0.41
CNOT3-204ENST00000447684 GGT7Q9UJ14 662 aa17.62■□□□□ 0.41
CNOT3-204ENST00000447684 C15orf41Q9Y2V0 281 aa17.62■□□□□ 0.41
CNOT3-204ENST00000447684 SMIM23A6NLE4 172 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 DIAPH2O60879 1101 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 DRD4P21917 467 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 C11orf91Q3C1V1 193 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 VWA3BQ502W6 1294 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 C3orf20Q8ND61 904 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 SAAL1Q96ER3 474 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 CHMP6Q96FZ7 201 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 YIPF3Q9GZM5 350 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 NEUROG2Q9H2A3 272 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 SLC39A2Q9NP94 309 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 CEP104O60308 925 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 FIGNQ5HY92 759 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 C1orf131Q8NDD1 294 aaKnown RBP17.61■□□□□ 0.41
CNOT3-204ENST00000447684 TRIM31Q9BZY9 425 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 ISCUQ9H1K1 167 aa17.61■□□□□ 0.41
CNOT3-204ENST00000447684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.61■□□□□ 0.41
CNOT3-204ENST00000447684 H0YGN5 161 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 PPIP5K2O43314 1243 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 ORC4O43929 436 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 KLRC1P26715 233 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 FUT2Q10981 343 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 ARMC9Q7Z3E5 817 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 VGLL2Q8N8G2 317 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 MAB21L3Q8N8X9 362 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 SPATA5Q8NB90 893 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 LRRC4CQ9HCJ2 640 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 NFS1Q9Y697 457 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 CYP2D7A0A087X1C5 515 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
CNOT3-204ENST00000447684 KRT28Q7Z3Y7 464 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 RNF10Q8N5U6 811 aaKnown RBP17.6■□□□□ 0.41
CNOT3-204ENST00000447684 USP38Q8NB14 1042 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 AGAP11Q8TF27 550 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 DDX47Q9H0S4 455 aaKnown RBP17.6■□□□□ 0.41
CNOT3-204ENST00000447684 PANK4Q9NVE7 773 aa17.6■□□□□ 0.41
CNOT3-204ENST00000447684 TLDC2A0PJX2 215 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 C5orf60A6NFR6 353 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 UQCRFS1P1P0C7P4 283 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 HNRNPH3P31942 346 aaKnown RBP17.59■□□□□ 0.41
CNOT3-204ENST00000447684 PPP2R5BQ15173 497 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 SEC23AQ15436 765 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 ZSCAN10Q96SZ4 725 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-204ENST00000447684 FAM167BQ9BTA0 163 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 SWAP70Q9UH65 585 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 SIK3Q9Y2K2 1263 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 PJA2O43164 708 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 DAPK3O43293 454 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 AP1G2O75843 785 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 TRIM28Q13263 835 aaKnown RBP17.59■□□□□ 0.41
CNOT3-204ENST00000447684 KIAA0753Q2KHM9 967 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 P3H4Q92791 437 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 INPP4AQ96PE3 977 aaPredicted RBP17.59■□□□□ 0.41
CNOT3-204ENST00000447684 PSMD1Q99460 953 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 ELAC2Q9BQ52 826 aaKnown RBP17.59■□□□□ 0.41
CNOT3-204ENST00000447684 DPH5Q9H2P9 285 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 BATF3Q9NR55 127 aa17.59■□□□□ 0.41
CNOT3-204ENST00000447684 ALS2Q96Q42 1657 aa17.58■□□□□ 0.41
CNOT3-204ENST00000447684 UPP2O95045 317 aa17.58■□□□□ 0.41
CNOT3-204ENST00000447684 INHBEP58166 350 aa17.58■□□□□ 0.41
CNOT3-204ENST00000447684 DHX9Q08211 1270 aaKnown RBP17.58■□□□□ 0.41
CNOT3-204ENST00000447684 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.41
CNOT3-204ENST00000447684 SPDYE1Q8NFV5 336 aaPredicted RBP17.58■□□□□ 0.41
CNOT3-204ENST00000447684 XPO6Q96QU8 1125 aaKnown RBP17.58■□□□□ 0.41
CNOT3-204ENST00000447684 TMEM60Q9H2L4 133 aa17.58■□□□□ 0.41
CNOT3-204ENST00000447684 DOCK2Q92608 1830 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 GRID2IPA4D2P6 1211 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 LCA5LO95447 670 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 VIMP08670 466 aaKnown RBP17.58■□□□□ 0.4
CNOT3-204ENST00000447684 GHRP10912 638 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 ECHS1P30084 290 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 STAG2Q8N3U4 1231 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 SRBD1Q8N5C6 995 aaKnown RBP17.58■□□□□ 0.4
CNOT3-204ENST00000447684 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.4
CNOT3-204ENST00000447684 LRRC15Q8TF66 581 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 TBC1D5Q92609 795 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 PRCCQ92733 491 aaPredicted RBP17.58■□□□□ 0.4
CNOT3-204ENST00000447684 GPKOWQ92917 476 aaPredicted RBP eCLIP17.58■□□□□ 0.4
CNOT3-204ENST00000447684 SH3GL3Q99963 347 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 PACSIN1Q9BY11 444 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 EBF2Q9HAK2 575 aa17.58■□□□□ 0.4
CNOT3-204ENST00000447684 NOP53Q9NZM5 478 aaKnown RBP17.58■□□□□ 0.4
CNOT3-204ENST00000447684 PDE8BO95263 885 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 PLCG1P19174 1290 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 RASGRF1Q13972 1273 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 RPS6KA1Q15418 735 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 SLC9C1Q4G0N8 1177 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 GOPCQ9HD26 462 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 LRP2BPQ9P2M1 347 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 ATP8A1Q9Y2Q0 1164 aa17.57■□□□□ 0.4
CNOT3-204ENST00000447684 MMEP08473 750 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms