RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 LPAR1Q92633 364 aa21.75■■□□□ 1.07
FAM3A-215ENST00000447601 UIMC1Q96RL1 719 aa21.75■■□□□ 1.07
FAM3A-215ENST00000447601 TUBGCP2Q9BSJ2 902 aa21.75■■□□□ 1.07
FAM3A-215ENST00000447601 SEMA6BQ9H3T3 888 aa21.75■■□□□ 1.07
FAM3A-215ENST00000447601 E9PMD0 336 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 MSH4O15457 936 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 MED24O75448 989 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 EGFRP00533 1210 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 FECHP22830 423 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 RPA1P27694 616 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 DNM2P50570 870 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 FXR1P51114 621 aaKnown RBP eCLIP21.74■■□□□ 1.07
FAM3A-215ENST00000447601 LRRC63Q05C16 580 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 CCDC65Q8IXS2 484 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 CNOT6LQ96LI5 555 aaKnown RBP21.74■■□□□ 1.07
FAM3A-215ENST00000447601 PANK4Q9NVE7 773 aa21.74■■□□□ 1.07
FAM3A-215ENST00000447601 GOLGB1Q14789 3259 aaKnown RBP21.74■■□□□ 1.07
FAM3A-215ENST00000447601 PES1O00541 588 aaKnown RBP21.73■■□□□ 1.07
FAM3A-215ENST00000447601 PRKCSHP14314 528 aaPredicted RBP21.73■■□□□ 1.07
FAM3A-215ENST00000447601 PTGER2P43116 358 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 COASYQ13057 564 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 LDHDQ86WU2 507 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 ZNF507Q8TCN5 953 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 FZD9O00144 591 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 WDR46O15213 610 aaKnown RBP21.73■■□□□ 1.07
FAM3A-215ENST00000447601 CTIFO43310 598 aaKnown RBP21.73■■□□□ 1.07
FAM3A-215ENST00000447601 CTNND1O60716 968 aaKnown RBP21.73■■□□□ 1.07
FAM3A-215ENST00000447601 ETF1P62495 437 aaKnown RBP21.73■■□□□ 1.07
FAM3A-215ENST00000447601 TOGARAM2Q6ZUX3 1019 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 CCDC84Q86UT8 332 aaPredicted RBP21.73■■□□□ 1.07
FAM3A-215ENST00000447601 GPBP1Q86WP2 473 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 CATSPER3Q86XQ3 398 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 KCTD17Q8N5Z5 321 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 TSG101Q99816 390 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 KIAA1683Q9H0B3 1180 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 FBXO28Q9NVF7 368 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 VAV3Q9UKW4 847 aa21.73■■□□□ 1.07
FAM3A-215ENST00000447601 BRCA1P38398 1863 aaKnown RBP21.72■■□□□ 1.07
FAM3A-215ENST00000447601 IGLV3-22A0A075B6J6 115 aa21.72■■□□□ 1.07
FAM3A-215ENST00000447601 MTIF2P46199 727 aaKnown RBP21.72■■□□□ 1.07
FAM3A-215ENST00000447601 R3HDM1Q15032 1099 aaKnown RBP21.72■■□□□ 1.07
FAM3A-215ENST00000447601 FAM26FQ5R3K3 315 aa21.72■■□□□ 1.07
FAM3A-215ENST00000447601 MYOCDQ8IZQ8 938 aa21.72■■□□□ 1.07
FAM3A-215ENST00000447601 SGIP1Q9BQI5 828 aa21.72■■□□□ 1.07
FAM3A-215ENST00000447601 DEFB129Q9H1M3 183 aa21.72■■□□□ 1.07
FAM3A-215ENST00000447601 ABHD10Q9NUJ1 306 aa21.72■■□□□ 1.07
FAM3A-215ENST00000447601 CNOT7Q9UIV1 285 aaKnown RBP21.72■■□□□ 1.07
FAM3A-215ENST00000447601 DNM3Q9UQ16 869 aa21.72■■□□□ 1.07
FAM3A-215ENST00000447601 PHLPP2Q6ZVD8 1323 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 PITPNM2Q9BZ72 1349 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 POTEFA5A3E0 1075 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 ICAM1P05362 532 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 POTEIP0CG38 1075 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 CYP11B2P19099 503 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 RASSF7Q02833 373 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 POTEGQ6S5H5 508 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 POTEEQ6S8J3 1075 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 SAMD1Q6SPF0 538 aaPredicted RBP21.71■■□□□ 1.07
FAM3A-215ENST00000447601 SYT10Q6XYQ8 523 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 HACL1Q9UJ83 578 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 SCAF8Q9UPN6 1271 aaKnown RBP21.71■■□□□ 1.07
FAM3A-215ENST00000447601 GJA3Q9Y6H8 435 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 SOWAHDA6NJG2 315 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 B4DLN1 442 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 CCDC175P0C221 793 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 SLC12A3P55017 1021 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 TBC1D10BQ4KMP7 808 aaPredicted RBP21.71■■□□□ 1.07
FAM3A-215ENST00000447601 SAMD7Q7Z3H4 446 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 TMTC1Q8IUR5 882 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 PRPF38AQ8NAV1 312 aaKnown RBP21.71■■□□□ 1.07
FAM3A-215ENST00000447601 TBC1D5Q92609 795 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 SLF1Q9BQI6 1058 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 RABGAP1Q9Y3P9 1069 aa21.71■■□□□ 1.07
FAM3A-215ENST00000447601 KIF20AO95235 890 aa21.7■■□□□ 1.06
FAM3A-215ENST00000447601 KRT18P05783 430 aaKnown RBP21.7■■□□□ 1.06
FAM3A-215ENST00000447601 SPATA31C1P0DKV0 1188 aa21.7■■□□□ 1.06
FAM3A-215ENST00000447601 INPP5BP32019 993 aa21.7■■□□□ 1.06
FAM3A-215ENST00000447601 KIF4BQ2VIQ3 1234 aa21.7■■□□□ 1.06
FAM3A-215ENST00000447601 CYP2W1Q8TAV3 490 aa21.7■■□□□ 1.06
FAM3A-215ENST00000447601 POLR3CQ9BUI4 534 aaPredicted RBP21.7■■□□□ 1.06
FAM3A-215ENST00000447601 NOC4LQ9BVI4 516 aaKnown RBP21.7■■□□□ 1.06
FAM3A-215ENST00000447601 CCPG1Q9ULG6 757 aa21.7■■□□□ 1.06
FAM3A-215ENST00000447601 KRT9P35527 623 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 RETREG2Q8NC44 543 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 NUP58Q9BVL2 599 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 FRMD3A2A2Y4 597 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 SETQ01105 290 aaPredicted RBP21.69■■□□□ 1.06
FAM3A-215ENST00000447601 TBC1D8BQ0IIM8 1120 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 FKBP15Q5T1M5 1219 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 DCAF15Q66K64 600 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 TRIM65Q6PJ69 517 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 CYP26C1Q6V0L0 522 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 RAD9BQ6WBX8 426 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 SYT2Q8N9I0 419 aaPredicted RBP21.69■■□□□ 1.06
FAM3A-215ENST00000447601 EEF2KMTQ96G04 330 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 WDR18Q9BV38 432 aa21.69■■□□□ 1.06
FAM3A-215ENST00000447601 HSD17B4P51659 736 aa21.68■■□□□ 1.06
FAM3A-215ENST00000447601 MTF1Q14872 753 aa21.68■■□□□ 1.06
FAM3A-215ENST00000447601 SYCP1Q15431 976 aa21.68■■□□□ 1.06
FAM3A-215ENST00000447601 CEP55Q53EZ4 464 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms