RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 LMOD3Q0VAK6 560 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 CNGB1Q14028 1251 aaPredicted RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 CAVIN4Q5BKX8 364 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 ABRAQ8N0Z2 381 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.1□□□□□ -1.75
PMS1-215ENST00000447232 WDR66Q8TBY9 1149 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 BTBD6Q96KE9 485 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 SH2B1Q9NRF2 756 aaPredicted RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 ZDHHC3Q9NYG2 299 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 SCHIP1Q9P0W5 487 aaPredicted RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 KLF15Q9UIH9 416 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 OTOGLQ3ZCN5 2332 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 GCN1Q92616 2671 aaKnown RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 CDK5RAP2Q96SN8 1893 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 DCDC2BA2VCK2 349 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 KIF28PB7ZC32 967 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L15C9J2P7 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L13C9JLJ4 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L11C9JVI0 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L18D6R9N7 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L22D6RA61 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L17D6RBQ6 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L19D6RCP7 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L20D6RJB6 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 BACH1O14867 736 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 MBTPS2O43462 519 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 ASGR1P07306 291 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 ASNSP08243 561 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 TMPOP42166 694 aaKnown RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 USP17L24Q0WX57 530 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 CBX2Q14781 532 aaPredicted RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 CATSPERGQ6ZRH7 1159 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 DEPDC4Q8N2C3 294 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 VGLL2Q8N8G2 317 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 SHCBP1Q8NEM2 672 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 SCLYQ96I15 445 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 MOV10L1Q9BXT6 1211 aaKnown RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 PUS3Q9BZE2 481 aaKnown RBP4.1□□□□□ -1.75
PMS1-215ENST00000447232 ZNF358Q9NW07 568 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 SLC5A4Q9NY91 659 aa4.1□□□□□ -1.75
PMS1-215ENST00000447232 A0A1B0GUL7 405 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 LOC730098B7Z3J9 87 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 EPHA4P54764 986 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 CCDC57Q2TAC2 916 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 LMBR1LQ6UX01 489 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 KIAA2013Q8IYS2 634 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 PCSK9Q8NBP7 692 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 ZDHHC1Q8WTX9 485 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 MRPL38Q96DV4 380 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 TINF2Q9BSI4 451 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 UPF3AQ9H1J1 476 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 PNNQ9H307 717 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 MROH5Q6ZUA9 1318 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 CLSPNQ9HAW4 1339 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 SALL1Q9NSC2 1324 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 SPEGQ15772 3267 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 POM121CA8CG34 1229 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 STXBP3O00186 592 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 KHNYNO15037 678 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 CTAGE5O15320 804 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 DUSP11O75319 330 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 PDGFBP01127 241 aaPredicted RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 ERCC3P19447 782 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 CD33P20138 364 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 AMPD1P23109 780 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 TXLNAP40222 546 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 RHBDL3P58872 404 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 NKX3-2P78367 333 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 PICALMQ13492 652 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 SHROOM1Q2M3G4 852 aaPredicted RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 USP17L2Q6R6M4 530 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 TGS1Q96RS0 853 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 SUV39H2Q9H5I1 410 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 GINM1Q9NU53 330 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 HERC5Q9UII4 1024 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 CHMP3Q9Y3E7 222 aa4.09□□□□□ -1.75
PMS1-215ENST00000447232 LAS1LQ9Y4W2 734 aaKnown RBP4.09□□□□□ -1.75
PMS1-215ENST00000447232 GRIN2DO15399 1336 aa4.09□□□□□ -1.76
PMS1-215ENST00000447232 TET1Q8NFU7 2136 aa4.09□□□□□ -1.76
PMS1-215ENST00000447232 ATG2AQ2TAZ0 1938 aa4.09□□□□□ -1.76
PMS1-215ENST00000447232 LINC01553A4QN01 128 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 ZZEF1O43149 2961 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 B4GALT4O60513 344 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 LDHBP07195 334 aaKnown RBP4.08□□□□□ -1.76
PMS1-215ENST00000447232 FAM157BP0CG42 384 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 ACTN1P12814 892 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 DGKGP49619 791 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 SMAD4Q13485 552 aaKnown RBP4.08□□□□□ -1.76
PMS1-215ENST00000447232 TIGD5Q53EQ6 642 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 TCEAL5Q5H9L2 206 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 TAF7LQ5H9L4 462 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 TMEM105Q8N8V8 129 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 RIPOR3Q96MK2 946 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 SPATC1LQ9H0A9 340 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 MYH16Q9H6N6 1097 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 DIS3Q9Y2L1 958 aaKnown RBP4.08□□□□□ -1.76
PMS1-215ENST00000447232 TANC1Q9C0D5 1861 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 NAV2Q8IVL1 2488 aa4.08□□□□□ -1.76
PMS1-215ENST00000447232 EFSO43281 561 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms